[←][→] ath   AT2G19830 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  ISS  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001318249.1  NP_179573.1 
BLAST NP_001318249.1  NP_179573.1 
Orthologous [Ortholog page] SNF7.1 (ath)  LOC4346566 (osa)  LOC4349637 (osa)  LOC4351360 (osa)  LOC11413678 (mtr)  LOC25497002 (mtr)  LOC100191358 (zma)  LOC100191382 (zma)  LOC100242218 (vvi)  LOC100242412 (vvi)  LOC100258281 (vvi)  LOC100281033 (zma)  LOC100780154 (gma)  LOC100789724 (gma)  LOC100792607 (gma)  LOC100810464 (gma)  LOC101248169 (sly)  LOC101264627 (sly)  LOC101268300 (sly)  LOC103654298 (zma)  LOC103828275 (bra)  LOC103837985 (bra)  LOC103853808 (bra)  LOC103861874 (bra) 
Subcellular
localization
wolf
cyto 3,  nucl 2,  cyto_E.R. 2,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001318249.1)
nucl 4,  nucl_plas 3,  chlo 2,  cyto 2,  mito 1  (predict for NP_179573.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318249.1)
other 7  (predict for NP_179573.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 7
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 2
Genes directly connected with SNF7.2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 RABG3E RAB GTPase homolog G3E [detail] 841353
6.5 VMA10 vacuolar membrane ATPase 10 [detail] 821130
6.3 SGR4 Vesicle transport v-SNARE family protein [detail] 833947
5.2 AT3G07940 Calcium-dependent ARF-type GTPase activating protein family [detail] 819985
4.9 VPS20.2 vacuolar protein sorting-associated protein 20.2 [detail] 830785
Coexpressed
gene list		 [Coexpressed gene list for SNF7.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266698_at
266698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266698_at
266698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266698_at
266698_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816502      
Refseq ID (protein) NP_001318249.1 
NP_179573.1 


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