[←][→] ath   At2g21660 Gene
functional annotation
Function   cold, circadian rhythm, and rna binding 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010501 [list] [network] RNA secondary structure unwinding  (2 genes)  IDA  
GO:0006858 [list] [network] extracellular transport  (4 genes)  IDA  
GO:1990428 [list] [network] miRNA transport  (6 genes)  IDA  
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (10 genes)  IMP  
GO:0006406 [list] [network] mRNA export from nucleus  (15 genes)  IMP  
GO:0032508 [list] [network] DNA duplex unwinding  (16 genes)  IDA  
GO:0050688 [list] [network] regulation of defense response to virus  (16 genes)  IDA  
GO:0050658 [list] [network] RNA transport  (26 genes)  IDA  
GO:0010043 [list] [network] response to zinc ion  (46 genes)  IEP  
GO:0010119 [list] [network] regulation of stomatal movement  (105 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP TAS  
GO:0045087 [list] [network] innate immune response  (161 genes)  IDA IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP IGI  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO CC
GO:0005615 [list] [network] extracellular space  (45 genes)  IDA  
GO:0005777 [list] [network] peroxisome  (311 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005773 [list] [network] vacuole  (971 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0035197 [list] [network] siRNA binding  (9 genes)  IDA  
GO:0035198 [list] [network] miRNA binding  (11 genes)  IDA  
GO:0003697 [list] [network] single-stranded DNA binding  (37 genes)  IDA  
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_179760.1  NP_850017.1 
BLAST NP_179760.1  NP_850017.1 
Orthologous [Ortholog page] LOC543231 (tae)  GRP (gma)  CCR1 (ath)  LOC4333690 (osa)  LOC4352868 (osa)  LOC7461222 (ppo)  LOC11413934 (mtr)  LOC11413936 (mtr)  LOC11420057 (mtr)  LOC18102138 (ppo)  LOC100037561 (tae)  LOC100305467 (gma)  LOC100777821 (gma)  LOC100796543 (gma)  LOC100796704 (gma)  LOC100806292 (gma)  LOC101262262 (sly)  GRP1 (sly)  LOC101266771 (sly)  LOC103835130 (bra)  LOC103835157 (bra)  LOC103842502 (bra)  LOC103846048 (bra)  LOC103864290 (bra)  LOC112998378 (gma)  LOC123087309 (tae)  LOC123095660 (tae)  LOC123102010 (tae)  LOC123130667 (tae)  LOC123134221 (tae)  LOC123141513 (tae)  LOC123400027 (hvu)  LOC123403078 (hvu)  LOC123447032 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_179760.1)
nucl 9  (predict for NP_850017.1)
Subcellular
localization
TargetP
other 7  (predict for NP_179760.1)
other 7  (predict for NP_850017.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with GRP7 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.4 CCR1 cold, circadian rhythm, and RNA binding 1 [detail] 830082
10.1 FKF1 flavin-binding, kelch repeat, f box 1 [detail] 843133
9.9 AT4G26670 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [detail] 828774
7.5 ALDH5F1 aldehyde dehydrogenase 5F1 [detail] 844282
6.9 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 816648
6.9 AT5G18540 E3 ubiquitin-protein ligase [detail] 831972
6.1 BAT1 bidirectional amino acid transporter 1 [detail] 814645
5.8 XBAT31 uncharacterized protein [detail] 817433
5.7 PMR5 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein (DUF828) [detail] 835974
Coexpressed
gene list		 [Coexpressed gene list for GRP7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263548_at
263548_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263548_at
263548_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263548_at
263548_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816705      
Refseq ID (protein) NP_179760.1 
NP_850017.1 


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