[←][→] ath   At2g21860 Gene
functional annotation
Function   violaxanthin de-epoxidase-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010028 [list] [network] xanthophyll cycle  (3 genes)  IEA  
GO:0033014 [list] [network] tetrapyrrole biosynthetic process  (85 genes)  IEA  
GO:0033013 [list] [network] tetrapyrrole metabolic process  (263 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0006082 [list] [network] organic acid metabolic process  (1847 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0046422 [list] [network] violaxanthin de-epoxidase activity  (2 genes)  IEA  
GO:0016851 [list] [network] magnesium chelatase activity  (5 genes)  IEA  
KEGG
Protein NP_565520.1 
BLAST NP_565520.1 
Orthologous [Ortholog page] LOC4325583 (osa)  LOC7477136 (ppo)  LOC11427448 (mtr)  LOC100812383 (gma)  LOC101260129 (sly)  LOC103864298 (bra)  LOC123061692 (tae)  LOC123070342 (tae)  LOC123078792 (tae)  LOC123444277 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_565520.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_565520.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 3
Genes directly connected with AT2G21860 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 PUR2 Glycinamide ribonucleotide (GAR) synthetase [detail] 837515
5.9 OCP3 overexpressor of cationic peroxidase 3 [detail] 830997
5.9 AT5G46580 pentatricopeptide (PPR) repeat-containing protein [detail] 834701
Coexpressed
gene list		 [Coexpressed gene list for AT2G21860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263873_at
263873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263873_at
263873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263873_at
263873_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816722      
Refseq ID (protein) NP_565520.1 


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