[←][→] ath   AT2G21940 Gene
functional annotation
Function   shikimate kinase 1  
GO BP
GO:0019632 [list] [network] shikimate metabolic process  (6 genes)  IDA  
GO:0009423 [list] [network] chorismate biosynthetic process  (10 genes)  IEA  
GO:0016310 [list] [network] phosphorylation  (1279 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA ISM TAS  
GO MF
GO:0004765 [list] [network] shikimate kinase activity  (4 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001077936.1  NP_001077937.1  NP_001077938.1  NP_001323558.1  NP_001323559.1  NP_179785.2  NP_973507.2 
BLAST NP_001077936.1  NP_001077937.1  NP_001077938.1  NP_001323558.1  NP_001323559.1  NP_179785.2  NP_973507.2 
Orthologous [Ortholog page] SK (sly)  SK2 (ath)  LOC4330732 (osa)  LOC4337165 (osa)  LOC4340547 (osa)  LOC7468745 (ppo)  LOC7486337 (ppo)  LOC100191326 (zma)  LOC100244261 (vvi)  LOC100262762 (vvi)  LOC100283304 (zma)  LOC100286040 (zma)  LOC100784290 (gma)  LOC100784736 (gma)  LOC100797982 (gma)  LOC100807736 (gma)  LOC102667853 (gma)  LOC103850170 (bra)  LOC103864307 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001077936.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_001077937.1)
cyto 4,  chlo 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001077938.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001323558.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001323559.1)
cyto 4,  chlo 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_179785.2)
cyto 4,  chlo 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_973507.2)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_001077936.1)
other 6,  chlo 5  (predict for NP_001077937.1)
other 5,  chlo 5  (predict for NP_001077938.1)
other 5,  chlo 5  (predict for NP_001323558.1)
other 5,  chlo 5  (predict for NP_001323559.1)
other 5,  chlo 5  (predict for NP_179785.2)
other 5,  chlo 5  (predict for NP_973507.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SK1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 TPR5 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 842097
5.0 AT1G71240 chromosome-partitioning protein, putative (DUF639) [detail] 843465
4.8 BOB1 HSP20-like chaperones superfamily protein [detail] 835421
Coexpressed
gene list		 [Coexpressed gene list for SK1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263897_at
263897_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263897_at
263897_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263897_at
263897_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816730      
Refseq ID (protein) NP_001077936.1 
NP_001077937.1 
NP_001077938.1 
NP_001323558.1 
NP_001323559.1 
NP_179785.2 
NP_973507.2 


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