ATTED-II : GeneID search result

[←][→] ath AT2G21960 Gene

functional annotation

Function

transmembrane protein

GO BP

GO:0006508 [list] [network] proteolysis

(901 genes)

IEA

GO CC

GO:0009534 [list] [network] chloroplast thylakoid	(474 genes)	IDA
GO:0005773 [list] [network] vacuole	(1133 genes)	HDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IDA ISM

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity	(48 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA

KEGG

Protein

NP_565523.1

BLAST

NP_565523.1

Orthologous

[Ortholog page] LOC4337160 (osa) LOC7477130 (ppo) LOC100264638 (vvi) LOC100272947 (zma) LOC100306288 (gma) LOC100807209 (gma) LOC101250205 (sly) LOC103864311 (bra)

Subcellular
localization
wolf

chlo 7, mito 1, plas 1, extr 1, pero 1, mito_plas 1

(predict for NP_565523.1)

Subcellular
localization
TargetP

chlo 7, mito 3

(predict for NP_565523.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G21960 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.6	Lhca5	photosystem I light harvesting complex protein 5	[detail]	841099
7.4	AT1G13820	alpha/beta-Hydrolases superfamily protein	[detail]	837943
7.4	AT1G18060	microbial collagenase	[detail]	838386
6.1	AT3G26070	Plastid-lipid associated protein PAP / fibrillin family protein	[detail]	822204

Coexpressed
gene list

[Coexpressed gene list for AT2G21960]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263880_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263880_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263880_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816732
Refseq ID (protein)	NP_565523.1

The preparation time of this page was 0.2 [sec].