[←][→] ath   At2g22310 Gene
functional annotation
Function   ubiquitin-specific protease 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (38 genes)  IDA  
KEGG
Protein NP_001318266.1  NP_001324040.1  NP_565532.1 
BLAST NP_001318266.1  NP_001324040.1  NP_565532.1 
Orthologous [Ortholog page] UBP3 (ath)  LOC4331901 (osa)  LOC4336009 (osa)  LOC7471503 (ppo)  LOC7490209 (ppo)  LOC11415028 (mtr)  LOC25501908 (mtr)  LOC100305765 (gma)  LOC100787737 (gma)  LOC100794462 (gma)  LOC100812627 (gma)  LOC101250454 (sly)  LOC101257760 (sly)  LOC103835085 (bra)  LOC103837901 (bra)  LOC103853712 (bra)  LOC123045626 (tae)  LOC123053474 (tae)  LOC123093455 (tae)  LOC123098734 (tae)  LOC123127531 (tae)  LOC123139208 (tae)  LOC123144621 (tae)  LOC123189392 (tae)  LOC123402891 (hvu)  LOC123426880 (hvu)  LOC123449674 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1  (predict for NP_001318266.1)
chlo 3,  nucl 2,  cyto 1,  extr 1,  vacu 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_001324040.1)
nucl 6,  cyto 4  (predict for NP_565532.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for NP_001318266.1)
scret 4  (predict for NP_001324040.1)
other 9  (predict for NP_565532.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath00562 Inositol phosphate metabolism 2
Genes directly connected with UBP4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 844191
5.5 Cand2 Protein of unknown function, transmembrane-40 [detail] 819662
5.2 IP5PI inositol polyphosphate 5-phosphatase I [detail] 840311
Coexpressed
gene list		 [Coexpressed gene list for UBP4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263428_at
263428_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263428_at
263428_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263428_at
263428_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816763      
Refseq ID (protein) NP_001318266.1 
NP_001324040.1 
NP_565532.1 


The preparation time of this page was 0.1 [sec].