ATTED-II : GeneID search result

[←][→] ath At2g22680 Gene

functional annotation

Function

Zinc finger (C3HC4-type RING finger) family protein

GO BP

GO:0009630 [list] [network] gravitropism	(103 genes)	IMP
GO:0016567 [list] [network] protein ubiquitination	(434 genes)	IDA
GO:0048364 [list] [network] root development	(1192 genes)	IMP

GO CC

GO:0005576 [list] [network] extracellular region

(3154 genes)

ISM

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(78 genes)

IDA

KEGG

Protein

NP_179853.1

BLAST

NP_179853.1

Orthologous

[Ortholog page] EDA40 (ath) AT5G49665 (ath) WAVH2 (ath) LOC4334888 (osa) LOC11442306 (mtr) LOC11446497 (mtr) LOC25495007 (mtr) LOC100779269 (gma) LOC100782780 (gma) LOC100785742 (gma) LOC100794006 (gma) LOC100794888 (gma) LOC100795015 (gma) LOC100811495 (gma) LOC100819417 (gma) LOC101250463 (sly) LOC101266631 (sly) LOC103848256 (bra) LOC103855312 (bra) LOC103862591 (bra) LOC103864375 (bra) LOC103874005 (bra) LOC123043287 (tae) LOC123051159 (tae) LOC123187114 (tae) LOC123424448 (hvu)

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1

(predict for NP_179853.1)

Subcellular
localization
TargetP

other 7

(predict for NP_179853.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with WAVH1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.8	EDA40	Zinc finger (C3HC4-type RING finger) family protein	[detail]	829945
5.6	AT4G37250	Leucine-rich repeat protein kinase family protein	[detail]	829879
4.1	SUT4	sucrose transporter 4	[detail]	837530

Coexpressed
gene list

[Coexpressed gene list for WAVH1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265345_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265345_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265345_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816799
Refseq ID (protein)	NP_179853.1

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