[←][→] ath   AT2G23800 Gene
functional annotation
Function   geranylgeranyl pyrophosphate synthase 2  
GO BP
GO:0033386 [list] [network] geranylgeranyl diphosphate biosynthetic process  (11 genes)  IEA  
GO:0033384 [list] [network] geranyl diphosphate biosynthetic process  (13 genes)  IEA  
GO:0045337 [list] [network] farnesyl diphosphate biosynthetic process  (15 genes)  IEA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (171 genes)  TAS  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004337 [list] [network] geranyltranstransferase activity  (14 genes)  IEA  
GO:0004161 [list] [network] dimethylallyltranstransferase activity  (15 genes)  IEA  
GO:0004311 [list] [network] farnesyltranstransferase activity  (18 genes)  IBA IDA IGI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (60 genes)
Protein NP_179960.1 
BLAST NP_179960.1 
Orthologous [Ortholog page] LOC103842398 (bra) 
Subcellular
localization
wolf
chlo 8,  E.R. 1  (predict for NP_179960.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_179960.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with GGPS2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 AT1G23240 Caleosin-related family protein [detail] 838933
9.9 AT2G03740 late embryogenesis abundant domain-containing protein / LEA domain-containing protein [detail] 814901
9.4 ATA27 Glycosyl hydrolase superfamily protein [detail] 843927
4.8 KT5 K+ transporter 5 [detail] 829385
4.6 STP9 sugar transporter 9 [detail] 841453
Coexpressed
gene list		 [Coexpressed gene list for GGPS2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267295_at
267295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267295_at
267295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267295_at
267295_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816912      
Refseq ID (protein) NP_179960.1 


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