[←][→] ath   At2g23800 Gene
functional annotation
Function   geranylgeranyl pyrophosphate synthase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0033384 [list] [network] geranyl diphosphate biosynthetic process  (10 genes)  IEA  
GO:0033386 [list] [network] geranylgeranyl diphosphate biosynthetic process  (10 genes)  IEA  
GO:0045337 [list] [network] farnesyl diphosphate biosynthetic process  (13 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (163 genes)  TAS  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0004311 [list] [network] farnesyltranstransferase activity  (12 genes)  IDA IGI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_179960.1 
BLAST NP_179960.1 
Orthologous [Ortholog page] LOC103842398 (bra) 
Subcellular
localization
wolf
chlo 8,  E.R. 1  (predict for NP_179960.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_179960.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
Genes directly connected with GGPS2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.6 AT1G23240 Caleosin-related family protein [detail] 838933
9.4 AT1G23570 hypothetical protein (DUF220) [detail] 838967
8.7 A7 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 828956
5.3 STP9 sugar transporter 9 [detail] 841453
Coexpressed
gene list		 [Coexpressed gene list for GGPS2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267295_at
267295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267295_at
267295_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267295_at
267295_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816912      
Refseq ID (protein) NP_179960.1 


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