[←][→] ath   At2g23900 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG
Protein NP_179968.2 
BLAST NP_179968.2 
Orthologous [Ortholog page] AT3G48950 (ath)  AT3G61490 (ath)  AT4G23500 (ath)  LOC4331458 (osa)  LOC4339868 (osa)  LOC7472748 (ppo)  LOC7494526 (ppo)  LOC7497216 (ppo)  LOC7497800 (ppo)  LOC11408934 (mtr)  LOC11414847 (mtr)  LOC11420475 (mtr)  LOC11421560 (mtr)  LOC11422557 (mtr)  LOC11440780 (mtr)  LOC18106471 (ppo)  LOC25500842 (mtr)  LOC25502095 (mtr)  LOC100776827 (gma)  LOC100778404 (gma)  LOC100779166 (gma)  LOC100785005 (gma)  LOC100785841 (gma)  LOC100787980 (gma)  LOC100794916 (gma)  LOC100795453 (gma)  LOC100803375 (gma)  LOC100816232 (gma)  LOC100818998 (gma)  LOC101247546 (sly)  LOC101255793 (sly)  LOC101258597 (sly)  LOC101265204 (sly)  LOC101265512 (sly)  LOC103841972 (bra)  LOC103861130 (bra)  LOC103861401 (bra)  LOC103864502 (bra)  LOC103873101 (bra)  LOC123088500 (tae)  LOC123093755 (tae)  LOC123098989 (tae)  LOC123105925 (tae)  LOC123149821 (tae)  LOC123165641 (tae)  LOC123413604 (hvu)  LOC123449865 (hvu) 
Subcellular
localization
wolf
cyto 2,  extr 2,  cyto_nucl 2,  chlo 1,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for NP_179968.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_179968.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 7
Genes directly connected with AT2G23900 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.0 AT5G39880 uncharacterized protein [detail] 833985
13.8 AT4G02250 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 827589
13.2 AT5G15110 Pectate lyase family protein [detail] 831363
10.4 PERK6 Protein kinase superfamily protein [detail] 821414
9.3 EXO70H3 exocyst subunit exo70 family protein H3 [detail] 820110
7.5 AT1G03050 ENTH/ANTH/VHS superfamily protein [detail] 839416
Coexpressed
gene list		 [Coexpressed gene list for AT2G23900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266558_at
266558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266558_at
266558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266558_at
266558_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816922      
Refseq ID (protein) NP_179968.2 


The preparation time of this page was 0.1 [sec].