[][] ath   AT2G25110 Gene
functional annotation
Function   stromal cell-derived factor 2-like protein precursor
GO BP
GO:0002221 [list] [network] pattern recognition receptor signaling pathway  (15 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0016020 [list] [network] membrane  (7839 genes)  IEA  
GO MF
KEGG
Protein NP_565585.1 
BLAST NP_565585.1 
Orthologous [Ortholog page] LOC4345160 (osa)LOC4345684 (osa)LOC7465411 (ppo)LOC7489148 (ppo)LOC11431487 (mtr)LOC100243952 (vvi)LOC100260264 (vvi)LOC100282939 (zma)LOC100284622 (zma)LOC100792538 (gma)LOC101245041 (sly)LOC103842211 (bra)LOC103864608 (bra)
Subcellular
localization
wolf
extr 5,  vacu 2,  E.R. 1,  E.R._plas 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_565585.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_565585.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 11
ath04145 Phagosome 3
Genes directly connected with SDF2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
21.6 UTR3 UDP-galactose transporter 3 [detail] 837998
20.7 ATERDJ3B DNAJ heat shock family protein [detail] 825434
20.1 CNX1 calnexin 1 [detail] 836301
19.7 UTR1 UDP-galactose transporter 1 [detail] 814811
18.9 PDIL2-2 PDI-like 2-2 [detail] 839355
16.9 PDIL1-2 PDI-like 1-2 [detail] 844087
11.5 AT1G14010 emp24/gp25L/p24 family/GOLD family protein [detail] 837961
11.0 ROC7 rotamase CYP 7 [detail] 835985
10.5 OS9 ER lectin-like protein [detail] 833459
8.9 p24delta5 emp24/gp25L/p24 family/GOLD family protein [detail] 838792
8.8 AT1G42480 TLR4 regulator/MIR-interacting MSAP protein [detail] 840852
8.5 EBS5 HCP-like superfamily protein [detail] 838406
8.3 GPT UDP-glcnac-adolichol phosphate glcnac-1-p-transferase [detail] 818747
6.7 AT4G17420 Tryptophan RNA-binding attenuator protein-like protein [detail] 827453
Coexpressed
gene list
[Coexpressed gene list for SDF2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264382_at
264382_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264382_at
264382_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
264382_at
264382_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817049    
Refseq ID (protein) NP_565585.1 


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