[][] ath   AT2G26540 Gene
functional annotation
Function   uroporphyrinogen-III synthase family protein
GO BP
GO:0006780 [list] [network] uroporphyrinogen III biosynthetic process  (1 genes)  IBA IDA  
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (15 genes)  IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (41 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO MF
GO:0004852 [list] [network] uroporphyrinogen-III synthase activity  (1 genes)  IBA IDA  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_001324266.1  NP_001324267.1  NP_565625.1 
BLAST NP_001324266.1  NP_001324267.1  NP_565625.1 
Orthologous [Ortholog page] LOC4331869 (osa)LOC11423221 (mtr)LOC100192907 (zma)LOC100250675 (vvi)LOC100808086 (gma)LOC101262008 (sly)LOC103842139 (bra)
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001324266.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001324267.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_565625.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001324266.1)
chlo 9  (predict for NP_001324267.1)
chlo 9  (predict for NP_565625.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00010 Glycolysis / Gluconeogenesis 2
ath01200 Carbon metabolism 2
Genes directly connected with HEMD on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.9 LPA3 Low PSII Accumulation 3 [detail] 843637
6.9 NUDX14 nudix hydrolase homolog 14 [detail] 826805
6.7 AT4G28706 pfkB-like carbohydrate kinase family protein [detail] 828990
6.0 AT1G26090 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839150
5.9 AT3G60810 DUF1499 family protein [detail] 825252
5.4 AT2G23820 Metal-dependent phosphohydrolase [detail] 816914
Coexpressed
gene list
[Coexpressed gene list for HEMD]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245042_at
245042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245042_at
245042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245042_at
245042_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817195    
Refseq ID (protein) NP_001324266.1 
NP_001324267.1 
NP_565625.1 


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