[←][→] ath   AT2G26590 Gene
functional annotation
Function   regulatory particle non-ATPase 13  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0008541 [list] [network] proteasome regulatory particle, lid subcomplex  (9 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0061133 [list] [network] endopeptidase activator activity  (1 genes)  IBA  
GO:0070628 [list] [network] proteasome binding  (16 genes)  IBA  
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_001031424.1  NP_001031425.1  NP_001325357.1  NP_565626.1 
BLAST NP_001031424.1  NP_001031425.1  NP_001325357.1  NP_565626.1 
Orthologous [Ortholog page] LOC4339809 (osa)  LOC7485521 (ppo)  LOC11435925 (mtr)  LOC100250036 (vvi)  LOC100281651 (zma)  LOC100799938 (gma)  LOC100815281 (gma)  LOC101258384 (sly)  LOC103858347 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_001031424.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_001031425.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_001325357.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_565626.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001031424.1)
other 5  (predict for NP_001031425.1)
other 5  (predict for NP_001325357.1)
other 5  (predict for NP_565626.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath03013 RNA transport 2
Genes directly connected with RPN13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 AT5G18420 CCR4-NOT transcription complex subunit [detail] 831960
7.7 PBE1 20S proteasome beta subunit E1 [detail] 837863
7.6 GRF5 general regulatory factor 5 [detail] 831462
7.3 FYPP1 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 841459
7.1 COP9 COP9 signalosome, subunit CSN8 [detail] 827049
6.7 PBS2 cysteine and histidine-rich domain-containing protein RAR1 [detail] 835244
6.6 AT3G07170 Sterile alpha motif (SAM) domain-containing protein [detail] 819904
5.3 SEH1H Transducin/WD40 repeat-like superfamily protein [detail] 842741
5.1 QQT2 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 828268
Coexpressed
gene list		 [Coexpressed gene list for RPN13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245045_at
245045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245045_at
245045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245045_at
245045_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817200      
Refseq ID (protein) NP_001031424.1 
NP_001031425.1 
NP_001325357.1 
NP_565626.1 


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