[←][→] ath   At2g27040 Gene
functional annotation
Function   Argonaute family protein      
GO BP
GO:0010495 [list] [network] siRNA-mediated long-distance post-transcriptional gene silencing  (3 genes)  IMP  
GO:0019048 [list] [network] modulation by virus of host process  (11 genes)  IMP  
GO:0051567 [list] [network] histone H3-K9 methylation  (11 genes)  IMP  
GO:0030422 [list] [network] siRNA processing  (30 genes)  IGI IMP  
GO:0006306 [list] [network] DNA methylation  (39 genes)  IMP  
GO:0031048 [list] [network] RNA-mediated heterochromatin formation  (45 genes)  TAS  
GO:0051607 [list] [network] defense response to virus  (53 genes)  IDA  
GO:0031507 [list] [network] heterochromatin formation  (62 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0000791 [list] [network] euchromatin  (11 genes)  IDA  
GO:0015030 [list] [network] Cajal body  (12 genes)  IDA  
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0035197 [list] [network] siRNA binding  (9 genes)  IDA  
GO:0004521 [list] [network] endoribonuclease activity  (82 genes)  IMP  
GO:0003682 [list] [network] chromatin binding  (105 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189613.1  NP_565633.1 
BLAST NP_001189613.1  NP_565633.1 
Orthologous [Ortholog page] AGO6 (ath)  AT5G21030 (ath)  AGO9 (ath)  LOC4324438 (osa)  LOC4335025 (osa)  LOC4342886 (osa)  LOC7453743 (ppo)  LOC7455965 (ppo)  LOC7479625 (ppo)  LOC7486850 (ppo)  LOC11428002 (mtr)  LOC11433384 (mtr)  LOC11433386 (mtr)  LOC11439465 (mtr)  LOC18094926 (ppo)  LOC25489582 (mtr)  LOC25496286 (mtr)  LOC100778875 (gma)  LOC100779439 (gma)  LOC100792105 (gma)  LOC100812218 (gma)  LOC100820376 (gma)  AGO4B (sly)  LOC101246438 (sly)  AGO4D (sly)  AGO4A (sly)  AGO6 (sly)  LOC103829646 (bra)  LOC103845605 (bra)  LOC103845620 (bra)  LOC103851403 (bra)  LOC103857461 (bra)  LOC103864747 (bra)  LOC123061099 (tae)  LOC123071173 (tae)  LOC123149573 (tae)  LOC123150147 (tae)  LOC123183434 (tae)  LOC123395895 (hvu)  LOC123411940 (hvu)  LOC123443511 (hvu)  LOC123452899 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_001189613.1)
nucl 8,  cyto 2  (predict for NP_565633.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001189613.1)
other 7,  chlo 5  (predict for NP_565633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AGO4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 NRPD1B nuclear RNA polymerase D1B [detail] 818591
7.0 AT5G26850 Uncharacterized protein [detail] 832743
7.0 CPSF160 cleavage and polyadenylation specificity factor 160 [detail] 835240
6.5 SUVR2 SET-domain containing protein lysine methyltransferase family protein [detail] 834422
6.0 BIO1 adenosylmethionine-8-amino-7-oxononanoate transaminase [detail] 835863
6.0 AT5G14610 DEAD box RNA helicase family protein [detail] 831313
5.5 UK/UPRT1 uridine kinase/uracil phosphoribosyltransferase 1 [detail] 834088
Coexpressed
gene list		 [Coexpressed gene list for AGO4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266314_at
266314_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266314_at
266314_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266314_at
266314_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817246      
Refseq ID (protein) NP_001189613.1 
NP_565633.1 


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