[←][→] ath   At2g28240 Gene
functional annotation
Function   ATP-dependent helicase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0031507 [list] [network] heterochromatin formation  (62 genes)  IEA  
GO:0031399 [list] [network] regulation of protein modification process  (104 genes)  IEA  
GO:0018205 [list] [network] peptidyl-lysine modification  (120 genes)  IEA  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (146 genes)  IEA  
GO:0016570 [list] [network] histone modification  (148 genes)  IEA  
GO:0009637 [list] [network] response to blue light  (160 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG
Protein NP_001324761.1  NP_180391.2 
BLAST NP_001324761.1  NP_180391.2 
Orthologous [Ortholog page] LOC103829719 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001324761.1)
nucl 9  (predict for NP_180391.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_001324761.1)
other 7,  chlo 4  (predict for NP_180391.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT2G28240 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [detail] 829247
8.6 ESP1 hydroxyproline-rich glycoprotein family protein [detail] 843720
8.4 AT3G26990 ENTH/VHS family protein [detail] 822316
7.8 AT1G62970 Chaperone DnaJ-domain superfamily protein [detail] 842599
7.4 MAC5B CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 817507
7.3 AT5G03450 Transducin/WD40 repeat-like superfamily protein [detail] 831835
7.3 AT3G32940 RNA-binding KH domain-containing protein [detail] 823058
7.2 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 843870
7.2 AT1G20670 DNA-binding bromodomain-containing protein [detail] 838655
6.9 AT5G65540 transcription initiation factor TFIID subunit [detail] 836680
6.7 PRP39-2 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834683
6.5 WRKY20 WRKY family transcription factor family protein [detail] 828771
6.2 AT5G41580 RING/U-box superfamily protein [detail] 834160
6.1 AT3G56590 hydroxyproline-rich glycoprotein family protein [detail] 824826
5.6 AT3G53860 INO80 complex subunit D-like protein [detail] 824553
Coexpressed
gene list		 [Coexpressed gene list for AT2G28240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265546_at
265546_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265546_at
265546_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265546_at
265546_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817370      
Refseq ID (protein) NP_001324761.1 
NP_180391.2 


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