[←][→] ath   At2g28540 Gene
functional annotation
Function   RNA binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001031437.2  NP_180421.3 
BLAST NP_001031437.2  NP_180421.3 
Orthologous [Ortholog page] AT3G45630 (ath)  AT5G60170 (ath)  LOC4349535 (osa)  LOC4351244 (osa)  LOC7465293 (ppo)  LOC7488143 (ppo)  LOC11406476 (mtr)  LOC11417361 (mtr)  LOC18100238 (ppo)  LOC25484052 (mtr)  LOC100780302 (gma)  LOC100796804 (gma)  LOC100801880 (gma)  LOC100805811 (gma)  LOC100807521 (gma)  LOC100813427 (gma)  LOC101247127 (sly)  LOC101251877 (sly)  LOC101252746 (sly)  LOC101257555 (sly)  LOC103829751 (bra)  LOC103833848 (bra)  LOC103846171 (bra)  LOC103856582 (bra)  LOC103856584 (bra)  LOC103864897 (bra)  LOC103873411 (bra)  LOC123103249 (tae)  LOC123111438 (tae)  LOC123120563 (tae)  LOC123398966 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001031437.2)
nucl 9  (predict for NP_180421.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001031437.2)
other 9  (predict for NP_180421.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
Genes directly connected with AT2G28540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 AT4G34280 transducin family protein / WD-40 repeat family protein [detail] 829578
6.5 AT5G49430 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein [detail] 835003
6.3 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 836139
Coexpressed
gene list		 [Coexpressed gene list for AT2G28540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264081_at
264081_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264081_at
264081_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264081_at
264081_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817402      
Refseq ID (protein) NP_001031437.2 
NP_180421.3 


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