ATTED-II : GeneID search result

[←][→] ath At2g28720 Gene

functional annotation

Function

Histone superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO CC

GO:0005777 [list] [network] peroxisome	(311 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

KEGG

Protein

NP_180440.1

BLAST

NP_180440.1

Orthologous

[Ortholog page] LOC543183 (tae) LOC543184 (tae) H2B-1 (sly) H2B-2 (sly) AT2G37470 (ath) AT3G09480 (ath) HTB9 (ath) HTB11 (ath) AT5G02570 (ath) HTB2 (ath) HTB4 (ath) HTB1 (ath) AT1G08170 (ath) LOC4324495 (osa) LOC4324500 (osa) LOC4324502 (osa) LOC4324504 (osa) LOC4324510 (osa) LOC4324512 (osa) LOC4327384 (osa) LOC4339681 (osa) LOC4345904 (osa) LOC7463471 (ppo) LOC7468455 (ppo) LOC9268195 (osa) LOC11416780 (mtr) LOC11417139 (mtr) LOC11426605 (mtr) LOC11431194 (mtr) LOC11432921 (mtr) LOC11442767 (mtr) LOC18099399 (ppo) LOC18101340 (ppo) LOC18101345 (ppo) LOC18101997 (ppo) LOC25484839 (mtr) LOC25485824 (mtr) LOC25492478 (mtr) LOC25492530 (mtr) LOC25492533 (mtr) LOC25492556 (mtr) LOC25492748 (mtr) LOC25493050 (mtr) AT3G53650 (ath) LOC100305731 (gma) LOC100305866 (gma) LOC100499734 (gma) LOC100500314 (gma) LOC100789702 (gma) LOC100793796 (gma) LOC100805396 (gma) LOC100806140 (gma) LOC100817849 (gma) LOC100820177 (gma) LOC101244346 (sly) LOC101245134 (sly) LOC101252186 (sly) LOC101253792 (sly) H2B-3 (sly) LOC101261496 (sly) LOC101264987 (sly) LOC101267024 (sly) LOC103829764 (bra) LOC103829945 (bra) LOC103841289 (bra) LOC103845413 (bra) LOC103845511 (bra) LOC103851535 (bra) LOC103856534 (bra) LOC103856593 (bra) LOC103858282 (bra) LOC103863386 (bra) LOC103864913 (bra) LOC103871565 (bra) LOC103873395 (bra) LOC104648016 (sly) LOC111828532 (gma) LOC123058767 (tae) LOC123060157 (tae) LOC123062534 (tae) LOC123065905 (tae) LOC123065907 (tae) LOC123067631 (tae) LOC123071359 (tae) LOC123071360 (tae) LOC123074963 (tae) LOC123077165 (tae) LOC123079622 (tae) LOC123079691 (tae) LOC123079692 (tae) LOC123085475 (tae) LOC123090912 (tae) LOC123092567 (tae) LOC123097871 (tae) LOC123123408 (tae) LOC123130073 (tae) LOC123131716 (tae) LOC123131742 (tae) LOC123131994 (tae) LOC123135599 (tae) LOC123135602 (tae) LOC123136072 (tae) LOC123143166 (tae) LOC123143167 (tae) LOC123143170 (tae) LOC123145258 (tae) LOC123149322 (tae) LOC123161516 (tae) LOC123182269 (tae) LOC123403140 (hvu) LOC123403540 (hvu) LOC123405990 (hvu) LOC123406969 (hvu) LOC123409969 (hvu) LOC123409970 (hvu) LOC123409971 (hvu) LOC123410923 (hvu) LOC123426815 (hvu) LOC123435801 (hvu) LOC123435817 (hvu) LOC123439792 (hvu) LOC123440449 (hvu) LOC123440491 (hvu) LOC123440547 (hvu) LOC123442703 (hvu) LOC123442706 (hvu) LOC123443358 (hvu) LOC123443409 (hvu) LOC123444939 (hvu) LOC123445412 (hvu) LOC123447601 (hvu) LOC123449496 (hvu) LOC123449853 (hvu) LOC123451652 (hvu) LOC123452195 (hvu)

Subcellular
localization
wolf

nucl 10

(predict for NP_180440.1)

Subcellular
localization
TargetP

other 9

(predict for NP_180440.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G28720 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
9.0	HMGB2	high mobility group B2	[detail]	838658
8.6	AT2G30620	winged-helix DNA-binding transcription factor family protein	[detail]	817612
7.0	HTB11	Histone superfamily protein	[detail]	823746
6.8	WRKY3	WRKY DNA-binding protein 3	[detail]	814863

Coexpressed
gene list

[Coexpressed gene list for AT2G28720]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263412_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263412_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263412_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	817421
Refseq ID (protein)	NP_180440.1

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