[←][→] ath   At2g29630 Gene
functional annotation
Function   thiaminC    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010266 [list] [network] response to vitamin B1  (2 genes)  IEP  
GO:0016045 [list] [network] detection of bacterium  (4 genes)  IMP  
GO:0009228 [list] [network] thiamine biosynthetic process  (5 genes)  IMP  
GO:0009229 [list] [network] thiamine diphosphate biosynthetic process  (6 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0080041 [list] [network] ADP-ribose pyrophosphohydrolase activity  (3 genes)  IGI  
GO:0051536 [list] [network] iron-sulfur cluster binding  (14 genes)  IDA  
GO:0016830 [list] [network] carbon-carbon lyase activity  (89 genes)  IEA  
KEGG ath00730 [list] [network] Thiamine metabolism (21 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001189634.1  NP_001325132.1  NP_180524.1  NP_850135.1 
BLAST NP_001189634.1  NP_001325132.1  NP_180524.1  NP_850135.1 
Orthologous [Ortholog page] LOC4333719 (osa)  LOC7468579 (ppo)  LOC18095058 (ppo)  LOC25490814 (mtr)  LOC100786478 (gma)  LOC100787350 (gma)  THIC (sly)  LOC103868019 (bra)  LOC123087299 (tae)  LOC123090650 (tae)  LOC123095671 (tae)  LOC123447067 (hvu) 
Subcellular
localization
wolf
pero 4,  chlo 4,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001189634.1)
cysk 6,  cyto 3,  cysk_nucl 3,  cysk_plas 3  (predict for NP_001325132.1)
pero 4,  chlo 4,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_180524.1)
pero 4,  chlo 4,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_850135.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001189634.1)
other 7  (predict for NP_001325132.1)
chlo 9  (predict for NP_180524.1)
chlo 9  (predict for NP_850135.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath01240 Biosynthesis of cofactors 3
ath00730 Thiamine metabolism 2
Genes directly connected with THIC on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 PWD chloroplastidic phosphoglucan, water dikinase (ATGWD3) [detail] 832706
8.5 HCAR coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family [detail] 839472
7.9 ACD32.1 alpha-crystallin domain 32.1 [detail] 837158
7.5 THI1 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) [detail] 835567
7.2 CHL chloroplastic lipocalin [detail] 823942
5.4 CT-BMY chloroplast beta-amylase [detail] 827419
Coexpressed
gene list		 [Coexpressed gene list for THIC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266673_at
266673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266673_at
266673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266673_at
266673_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817513      
Refseq ID (protein) NP_001189634.1 
NP_001325132.1 
NP_180524.1 
NP_850135.1 


The preparation time of this page was 0.3 [sec].