[←][→] ath   AT2G30000 Gene
functional annotation
Function   PHF5-like protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA  
GO:0005686 [list] [network] U2 snRNP  (32 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_565691.1 
BLAST NP_565691.1 
Orthologous [Ortholog page] AT1G07170 (ath)  LOC4337303 (osa)  LOC4338563 (osa)  LOC7463896 (ppo)  LOC7475011 (ppo)  LOC11414620 (mtr)  LOC25490917 (mtr)  LOC100253580 (vvi)  LOC100282173 (zma)  LOC100286340 (zma)  LOC100305969 (gma)  LOC100777021 (gma)  LOC100853212 (vvi)  LOC101247104 (sly)  LOC103843972 (bra)  LOC103857282 (bra)  LOC103865000 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk_nucl 1  (predict for NP_565691.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565691.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G30000 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT5G09270 transmembrane protein [detail] 830786
5.9 AT3G53220 Thioredoxin superfamily protein [detail] 824488
5.8 AT3G57360 tRNA-splicing endonuclease subunit [detail] 824903
4.8 AT3G45020 Ribosomal L18p/L5e family protein [detail] 823637
Coexpressed
gene list		 [Coexpressed gene list for AT2G30000]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266806_at
266806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266806_at
266806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266806_at
266806_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817551      
Refseq ID (protein) NP_565691.1 


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