ATTED-II : GeneID search result

[←][→] ath At2g30840 Gene

functional annotation

Function

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

GO BP

GO:0006568 [list] [network] tryptophan metabolic process	(46 genes)	IEA
GO:0090558 [list] [network] plant epidermis development	(635 genes)	IEA
GO:0010015 [list] [network] root morphogenesis	(669 genes)	IEA
GO:1901701 [list] [network] cellular response to oxygen-containing compound	(1115 genes)	IEA
GO:0032870 [list] [network] cellular response to hormone stimulus	(1136 genes)	IEA
GO:0007165 [list] [network] signal transduction	(2054 genes)	IEA
GO:0098542 [list] [network] defense response to other organism	(2060 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13880 genes)

ISM

GO MF

GO:0009815 [list] [network] 1-aminocyclopropane-1-carboxylate oxidase activity

(12 genes)

ISS

KEGG

Protein

NP_001325212.1 NP_001325213.1 NP_180642.1

BLAST

NP_001325212.1 NP_001325213.1 NP_180642.1

Orthologous

[Ortholog page] E8 (sly) AT2G25450 (ath) AT2G30830 (ath) AT3G61400 (ath) AT5G43440 (ath) AT5G43450 (ath) AT5G59530 (ath) AT5G59540 (ath) AT1G06620 (ath) AT1G06640 (ath) AT1G06650 (ath) AT1G03400 (ath) 2A6 (ath) AT1G04380 (ath) AT1G04350 (ath) AT1G06645 (ath) LOC4333774 (osa) LOC4335099 (osa) LOC7474620 (ppo) LOC7476902 (ppo) LOC7479980 (ppo) LOC7485152 (ppo) LOC7487408 (ppo) LOC7498016 (ppo) LOC7498017 (ppo) LOC7498018 (ppo) LOC11405673 (mtr) LOC11406189 (mtr) LOC11408358 (mtr) LOC11409009 (mtr) LOC11409250 (mtr) LOC11409504 (mtr) LOC11409765 (mtr) LOC11410509 (mtr) LOC11410704 (mtr) LOC11410782 (mtr) LOC11410784 (mtr) LOC11413339 (mtr) LOC11418386 (mtr) LOC11418387 (mtr) LOC11419853 (mtr) LOC11421214 (mtr) LOC11424282 (mtr) LOC11429536 (mtr) LOC11429538 (mtr) LOC11431109 (mtr) LOC11434481 (mtr) LOC11434538 (mtr) LOC11434967 (mtr) LOC11438884 (mtr) LOC18101595 (ppo) LOC18102482 (ppo) LOC18106584 (ppo) LOC18106587 (ppo) LOC25479840 (mtr) LOC25483008 (mtr) LOC25484298 (mtr) LOC25493597 (mtr) LOC25494048 (mtr) LOC25497878 (mtr) LOC25498293 (mtr) LOC25498303 (mtr) LOC25500056 (mtr) LOC25500804 (mtr) ODD (sly) LOC100777564 (gma) LOC100778953 (gma) LOC100781078 (gma) LOC100781624 (gma) LOC100785833 (gma) LOC100786255 (gma) LOC100787331 (gma) LOC100789941 (gma) LOC100790198 (gma) LOC100792296 (gma) LOC100792753 (gma) LOC100806682 (gma) LOC100809768 (gma) LOC100815823 (gma) LOC100815890 (gma) LOC101244528 (sly) LOC101245098 (sly) LOC101245399 (sly) LOC101245697 (sly) LOC101245991 (sly) LOC101246865 (sly) LOC101247162 (sly) LOC101248415 (sly) LOC101249199 (sly) LOC101249481 (sly) LOC101250009 (sly) LOC101250295 (sly) LOC101259580 (sly) LOC101259885 (sly) LOC101260178 (sly) ACO3 (sly) LOC102659434 (gma) LOC102659833 (gma) LOC102667868 (gma) LOC102668613 (gma) LOC102669426 (gma) LOC103836579 (bra) LOC103841969 (bra) LOC103843501 (bra) LOC103843502 (bra) LOC103843543 (bra) LOC103843658 (bra) LOC103844023 (bra) LOC103844024 (bra) LOC103844025 (bra) LOC103844262 (bra) LOC103844264 (bra) LOC103844266 (bra) LOC103844507 (bra) LOC103844509 (bra) LOC103856626 (bra) LOC103856627 (bra) LOC103856628 (bra) LOC103856629 (bra) GSL-OH (bra) LOC103865075 (bra) LOC103865076 (bra) LOC103865077 (bra) LOC103865078 (bra) LOC103865081 (bra) LOC103869588 (bra) LOC106798825 (gma) LOC117125692 (bra) LOC117128368 (bra) LOC123040041 (tae) LOC123040049 (tae) LOC123043181 (tae) LOC123048248 (tae) LOC123048250 (tae) LOC123048251 (tae) LOC123051068 (tae) LOC123051075 (tae) LOC123058656 (tae) LOC123072301 (tae) LOC123074846 (tae) LOC123076530 (tae) LOC123088671 (tae) LOC123111152 (tae) LOC123176144 (tae) LOC123180396 (tae) LOC123184283 (tae) LOC123184284 (tae) LOC123184287 (tae) LOC123184291 (tae) LOC123186187 (tae) LOC123186994 (tae) LOC123187000 (tae) LOC123190830 (tae) LOC123407181 (hvu) LOC123408335 (hvu) LOC123424365 (hvu) LOC123424367 (hvu) LOC123424865 (hvu) LOC123429116 (hvu) LOC123429118 (hvu) LOC123440337 (hvu)

Subcellular
localization
wolf

cyto 7, nucl 1, vacu 1, cysk 1, golg 1, cysk_nucl 1	(predict for NP_001325212.1)
cyto 8, nucl 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1	(predict for NP_001325213.1)
cyto 8, nucl 1	(predict for NP_180642.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001325212.1)
other 8	(predict for NP_001325213.1)
other 8	(predict for NP_180642.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G30840 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.1	FLS5	flavonol synthase 5	[detail]	836480
6.0	AT5G59530	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	836072
5.9	AT3G57380	Glycosyltransferase family 61 protein	[detail]	824905
5.6	CYP72A14	cytochrome P450, family 72, subfamily A, polypeptide 14	[detail]	820696
5.4	MYB45	myb domain protein 45	[detail]	824053
5.1	AT5G01250	alpha 1,4-glycosyltransferase family protein	[detail]	831833

Coexpressed
gene list

[Coexpressed gene list for AT2G30840]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

267207_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

267207_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

267207_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	817635
Refseq ID (protein)	NP_001325212.1
	NP_001325213.1
	NP_180642.1

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