[←][→] ath   At2g30950 Gene
functional annotation
Function   FtsH extracellular protease family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (8 genes)  TAS  
GO:0010205 [list] [network] photoinhibition  (11 genes)  IMP  
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0048564 [list] [network] photosystem I assembly  (16 genes)  IMP  
GO:0072593 [list] [network] reactive oxygen species metabolic process  (47 genes)  IDA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IGI  
GO:0030163 [list] [network] protein catabolic process  (321 genes)  IDA  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0005777 [list] [network] peroxisome  (311 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (16 genes)  ISS  
GO:0008237 [list] [network] metallopeptidase activity  (53 genes)  ISS  
KEGG
Protein NP_001323509.1  NP_001323510.1  NP_001323511.1  NP_850156.1 
BLAST NP_001323509.1  NP_001323510.1  NP_001323511.1  NP_850156.1 
Orthologous [Ortholog page] ftsH6 (sly)  FTSH6 (ath)  FTSH8 (ath)  LOC4340563 (osa)  LOC4341796 (osa)  LOC7457995 (ppo)  LOC7489894 (ppo)  LOC11414171 (mtr)  LOC18096512 (ppo)  LOC25488224 (mtr)  LOC25493413 (mtr)  LOC100786960 (gma)  LOC100788601 (gma)  FTSH9 (gma)  LOC100798355 (gma)  LOC100800550 (gma)  LOC100816354 (gma)  LOC101266739 (sly)  LOC103836478 (bra)  LOC103844041 (bra)  LOC103846427 (bra)  LOC103867923 (bra)  LOC123149152 (tae)  LOC123159943 (tae)  LOC123161268 (tae)  LOC123164751 (tae)  LOC123165258 (tae)  LOC123407214 (hvu)  LOC123411777 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001323509.1)
chlo 9  (predict for NP_001323510.1)
chlo 9  (predict for NP_001323511.1)
chlo 9  (predict for NP_850156.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001323509.1)
chlo 9  (predict for NP_001323510.1)
chlo 9  (predict for NP_001323511.1)
chlo 9  (predict for NP_850156.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VAR2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.3 VAR1 FtsH extracellular protease family [detail] 834232
12.1 FTSH1 FTSH protease 1 [detail] 841447
10.2 CLPC1 CLPC homologue 1 [detail] 835165
10.1 PREP1 presequence protease 1 [detail] 821451
9.6 AT5G05200 Protein kinase superfamily protein [detail] 830402
9.4 HDS 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [detail] 836181
9.4 PDS3 phytoene desaturase 3 [detail] 827061
9.3 ACD1-LIKE ACD1-like protein [detail] 828670
8.4 AT1G79600 Protein kinase superfamily protein [detail] 844298
6.7 FIB4 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 821921
Coexpressed
gene list		 [Coexpressed gene list for VAR2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267196_at
267196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267196_at
267196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267196_at
267196_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817646      
Refseq ID (protein) NP_001323509.1 
NP_001323510.1 
NP_001323511.1 
NP_850156.1 


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