[←][→] ath   At2g31890 Gene
functional annotation
Function   RAP    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO CC
GO:0042646 [list] [network] plastid nucleoid  (50 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IMP  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG
Protein NP_850176.1 
BLAST NP_850176.1 
Orthologous [Ortholog page] AL1 (osa)  LOC18106372 (ppo)  LOC25502299 (mtr)  LOC100794144 (gma)  LOC100805208 (gma)  LOC101258337 (sly)  LOC103857404 (bra)  LOC123060241 (tae)  LOC123068747 (tae)  LOC123077249 (tae)  LOC123442779 (hvu) 
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_850176.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_850176.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RAP on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.1 FLN1 fructokinase-like 1 [detail] 824576
13.8 PDE312 Nucleic acid-binding, OB-fold-like protein [detail] 824009
13.6 FLN2 fructokinase-like protein [detail] 843251
13.2 emb2738 GTP-binding family protein [detail] 820382
10.9 PTAC14 plastid transcriptionally active 14 [detail] 827759
10.1 EMB3129 GTP-binding family protein [detail] 828174
8.7 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein [detail] 829958
8.7 EMB2219 Mitochondrial transcription termination factor family protein [detail] 816708
8.2 SVR1 pseudouridine synthase family protein [detail] 818500
Coexpressed
gene list		 [Coexpressed gene list for RAP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263471_at
263471_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263471_at
263471_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263471_at
263471_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817747      
Refseq ID (protein) NP_850176.1 


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