[][] ath   AT2G31890 Gene
functional annotation
Function   RAP
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (44 genes)  IEA  
GO:0042646 [list] [network] plastid nucleoid  (48 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IMP  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
KEGG
Protein NP_850176.1 
BLAST NP_850176.1 
Orthologous [Ortholog page] LOC4333151 (osa)LOC25502299 (mtr)LOC100257808 (vvi)LOC100794144 (gma)LOC100805208 (gma)LOC101258337 (sly)LOC103649620 (zma)LOC103857404 (bra)
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_850176.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_850176.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RAP on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
13.3 PDE312 Nucleic acid-binding, OB-fold-like protein [detail] 824009
13.0 emb2738 GTP-binding family protein [detail] 820382
12.7 FLN2 fructokinase-like protein [detail] 843251
8.1 EMB2219 Mitochondrial transcription termination factor family protein [detail] 816708
7.7 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein [detail] 829958
5.7 AT1G78010 tRNA modification GTPase [detail] 844136
Coexpressed
gene list
[Coexpressed gene list for RAP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263471_at
263471_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263471_at
263471_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
263471_at
263471_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817747    
Refseq ID (protein) NP_850176.1 


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