ATTED-II : GeneID search result

[←][→] ath At2g32390 Gene

functional annotation

Function

glutamate receptor 3.5

GO BP

GO:0070584 [list] [network] mitochondrion morphogenesis	(1 genes)	IMP
GO:0007186 [list] [network] G protein-coupled receptor signaling pathway	(20 genes)	IEA
GO:0071230 [list] [network] cellular response to amino acid stimulus	(20 genes)	ISS
GO:0006874 [list] [network] cellular calcium ion homeostasis	(28 genes)	NAS
GO:0006816 [list] [network] calcium ion transport	(55 genes)	ISS
GO:0019722 [list] [network] calcium-mediated signaling	(77 genes)	ISS
GO:0009845 [list] [network] seed germination	(99 genes)	IMP
GO:0009416 [list] [network] response to light stimulus	(1981 genes)	NAS

GO CC

GO:0005886 [list] [network] plasma membrane	(2529 genes)	ISM ISS
GO:0005576 [list] [network] extracellular region	(3154 genes)	ISM
GO:0005739 [list] [network] mitochondrion	(4228 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	IDA ISM

GO MF

GO:0008066 [list] [network] glutamate receptor activity	(20 genes)	ISS
GO:0005217 [list] [network] intracellular ligand-gated monoatomic ion channel activity	(24 genes)	ISS
GO:0005262 [list] [network] calcium channel activity	(33 genes)	ISS
GO:0005216 [list] [network] monoatomic ion channel activity	(108 genes)	IPI

KEGG

Protein

NP_001031464.1 NP_001318335.1 NP_001324010.1 NP_001324011.1 NP_001324012.1 NP_001324013.1 NP_565743.1

BLAST

NP_001031464.1 NP_001318335.1 NP_001324010.1 NP_001324011.1 NP_001324012.1 NP_001324013.1 NP_565743.1

Orthologous

[Ortholog page] GLR3.4 (ath) LOC4341854 (osa) LOC4342180 (osa) LOC4343413 (osa) LOC7462051 (ppo) LOC7489905 (ppo) LOC11412759 (mtr) LOC100783715 (gma) LOC100792741 (gma) LOC100799912 (gma) LOC100802782 (gma) LOC101246724 (sly) LOC101252791 (sly) LOC103843622 (bra) LOC103844161 (bra) LOC103857425 (bra) LOC103867642 (bra) LOC123044659 (tae) LOC123045151 (tae) LOC123052536 (tae) LOC123052979 (tae) LOC123067785 (tae) LOC123145393 (tae) LOC123149024 (tae) LOC123156334 (tae) LOC123164237 (tae) LOC123183054 (tae) LOC123188413 (tae) LOC123188800 (tae) LOC123407833 (hvu) LOC123425866 (hvu) LOC123426377 (hvu) LOC123450000 (hvu)

Subcellular
localization
wolf

plas 5, chlo 2, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_001031464.1)
plas 9, vacu 1	(predict for NP_001318335.1)
plas 9, vacu 1	(predict for NP_001324010.1)
plas 9, vacu 1	(predict for NP_001324011.1)
plas 9, vacu 1	(predict for NP_001324012.1)
plas 10	(predict for NP_001324013.1)
nucl 3, cyto 2, plas 2, vacu 2, cyto_plas 2	(predict for NP_565743.1)

Subcellular
localization
TargetP

other 6	(predict for NP_001031464.1)
scret 8	(predict for NP_001318335.1)
scret 8	(predict for NP_001324010.1)
scret 8	(predict for NP_001324011.1)
scret 8	(predict for NP_001324012.1)
scret 8	(predict for NP_001324013.1)
mito 8	(predict for NP_565743.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with GLR3.5 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.2	AT3G44450	uncharacterized protein	[detail]	823570
5.0	GLR3.3	glutamate receptor 3.3	[detail]	840859
4.9	AT5G02180	Transmembrane amino acid transporter family protein	[detail]	831862

Coexpressed
gene list

[Coexpressed gene list for GLR3.5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266337_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266337_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266337_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	817800
Refseq ID (protein)	NP_001031464.1
	NP_001318335.1
	NP_001324010.1
	NP_001324011.1
	NP_001324012.1
	NP_001324013.1
	NP_565743.1

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