[←][→] ath   At2g33790 Gene
functional annotation
Function   arabinogalactan protein 30    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:2000033 [list] [network] regulation of seed dormancy process  (14 genes)  IMP  
GO:2000280 [list] [network] regulation of root development  (75 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG
Protein NP_180935.1 
BLAST NP_180935.1 
Orthologous [Ortholog page] AT2G34700 (ath)  AGP31 (ath)  LOC4324728 (osa)  LOC4324730 (osa)  LOC4339414 (osa)  LOC4339415 (osa)  LOC7477398 (ppo)  LOC11411570 (mtr)  LOC11417383 (mtr)  LOC11436430 (mtr)  LOC11439955 (mtr)  LOC11442776 (mtr)  LOC18103034 (ppo)  LOC25483671 (mtr)  LOC25488572 (mtr)  LOC25492113 (mtr)  LOC25492114 (mtr)  LOC25492645 (mtr)  LOC25493149 (mtr)  LOC25493150 (mtr)  LOC100777472 (gma)  LOC101247694 (sly)  LOC101253046 (sly)  LOC101253344 (sly)  LOC101253856 (sly)  LOC103829021 (bra)  LOC103838969 (bra)  LOC103865297 (bra)  LOC103867426 (bra)  LOC103868247 (bra)  LOC117133380 (bra)  LOC123058552 (tae)  LOC123064723 (tae)  LOC123065649 (tae)  LOC123066242 (tae)  LOC123067571 (tae)  LOC123074735 (tae)  LOC123074736 (tae)  LOC123080401 (tae)  LOC123096802 (tae)  LOC123096812 (tae)  LOC123096821 (tae)  LOC123173864 (tae)  LOC123173917 (tae)  LOC123173933 (tae)  LOC123173949 (tae)  LOC123180049 (tae)  LOC123417672 (hvu)  LOC123417688 (hvu)  LOC123417704 (hvu)  LOC123440191 (hvu)  LOC123440192 (hvu) 
Subcellular
localization
wolf
extr 3,  chlo 2,  vacu 1,  chlo_mito 1,  mito 1,  E.R._vacu 1  (predict for NP_180935.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_180935.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AGP30 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.4 AT5G62340 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 836355
10.5 AT5G54370 Late embryogenesis abundant (LEA) protein-like protein [detail] 835525
10.4 AT4G25250 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 828628
9.7 AT2G39040 Peroxidase superfamily protein [detail] 818490
8.9 AT1G05660 Pectin lyase-like superfamily protein [detail] 837073
6.1 CLE5 CLAVATA3/ESR-RELATED 5 [detail] 817663
Coexpressed
gene list		 [Coexpressed gene list for AGP30]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267457_at
267457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267457_at
267457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267457_at
267457_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817946      
Refseq ID (protein) NP_180935.1 


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