[][] ath   AT2G33800 Gene
functional annotation
Function   Ribosomal protein S5 family protein
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0032544 [list] [network] plastid translation  (16 genes)  IMP  
GO:0009955 [list] [network] adaxial/abaxial pattern specification  (36 genes)  IGI  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP IMP  
GO CC
GO:0005763 [list] [network] mitochondrial small ribosomal subunit  (12 genes)  IBA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA IMP ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_180936.1 
BLAST NP_180936.1 
Orthologous [Ortholog page] LOC4333233 (osa)LOC7456788 (ppo)LOC25493131 (mtr)LOC100264070 (vvi)LOC100787105 (gma)LOC100820232 (gma)LOC101255358 (sly)LOC103643355 (zma)LOC103865299 (bra)LOC104878526 (vvi)LOC104878546 (vvi)
Subcellular
localization
wolf
chlo 9  (predict for NP_180936.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_180936.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
Genes directly connected with EMB3113 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
15.9 RPL15 ribosomal protein L15 [detail] 822189
15.7 AT4G01310 Ribosomal L5P family protein [detail] 827947
13.7 RPL4 ribosomal protein L4 [detail] 837243
13.4 AT3G54210 Ribosomal protein L17 family protein [detail] 824588
12.7 RBP31 31-kDa RNA binding protein [detail] 828579
11.1 GHS1 Ribosomal protein S21 family protein [detail] 822335
Coexpressed
gene list
[Coexpressed gene list for EMB3113]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267435_at
267435_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267435_at
267435_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
267435_at
267435_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817947    
Refseq ID (protein) NP_180936.1 


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