| functional annotation |
| Function |
plastid transcriptionally active 12 |
|
| GO BP |
|
GO:0090228 [list] [network] positive regulation of red or far-red light signaling pathway
|
(1 genes)
|
IMP
|
 |
|
GO:0042793 [list] [network] plastid transcription
|
(13 genes)
|
IMP
|
|
|
GO:0010218 [list] [network] response to far red light
|
(48 genes)
|
IEP
|
|
|
GO:0010114 [list] [network] response to red light
|
(101 genes)
|
IEP
|
|
|
GO:0009637 [list] [network] response to blue light
|
(160 genes)
|
IEP
|
|
|
GO:0045893 [list] [network] positive regulation of DNA-templated transcription
|
(272 genes)
|
IMP
|
|
|
GO:0009416 [list] [network] response to light stimulus
|
(1981 genes)
|
IEP
|
|
= more 2 terms =
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_181011.2
|
| BLAST |
NP_181011.2
|
| Orthologous |
[Ortholog page]
LOC4325601 (osa)
LOC7470815 (ppo)
LOC11438320 (mtr)
LOC100798194 (gma)
LOC101055518 (sly)
LOC103867432 (bra)
LOC123062184 (tae)
LOC123070917 (tae)
LOC123079300 (tae)
LOC123444516 (hvu)
|
Subcellular
localization
wolf |
|
nucl 6,
chlo 4
|
(predict for NP_181011.2)
|
|
Subcellular
localization
TargetP |
|
chlo 5
|
(predict for NP_181011.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with PTAC12 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 18.0 |
FLN2 |
fructokinase-like protein |
[detail] |
843251 |
| 16.6 |
PDE312 |
Nucleic acid-binding, OB-fold-like protein |
[detail] |
824009 |
| 15.6 |
FLN1 |
fructokinase-like 1 |
[detail] |
824576 |
| 13.1 |
RFC3 |
Translation elongation factor EF1B/ribosomal protein S6 family protein |
[detail] |
820974 |
| 13.1 |
FTSH12 |
FTSH protease 12 |
[detail] |
844294 |
| 12.1 |
TIC110 |
translocon at the inner envelope membrane of chloroplasts 110 |
[detail] |
837205 |
| 11.9 |
EMB3144 |
AAA-type ATPase family protein |
[detail] |
836579 |
| 11.8 |
EMB269 |
GTP1/OBG family protein |
[detail] |
831975 |
| 11.8 |
AT5G66470 |
GTP-binding protein Era-like protein |
[detail] |
836779 |
| 11.5 |
AT2G39670 |
Radical SAM superfamily protein |
[detail] |
818550 |
| 11.5 |
PTAC3 |
plastid transcriptionally active 3 |
[detail] |
819581 |
| 11.4 |
AT3G18680 |
Amino acid kinase family protein |
[detail] |
821399 |
| 10.8 |
PRORP1 |
proteinaceous RNase P 1 |
[detail] |
817782 |
| 10.7 |
FSD3 |
Fe superoxide dismutase 3 |
[detail] |
832395 |
| 10.4 |
emb2746 |
RNA-metabolising metallo-beta-lactamase family protein |
[detail] |
836461 |
| 9.0 |
OSB3 |
organellar single-stranded DNA binding protein 3 |
[detail] |
834508 |
| 7.3 |
PAC |
pale cress protein (PAC) |
[detail] |
819424 |
| 7.1 |
AT4G21770 |
Pseudouridine synthase family protein |
[detail] |
828265 |
|
Coexpressed
gene list |
[Coexpressed gene list for PTAC12]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
266957_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
266957_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
266957_at
X axis is samples (xls file), and Y axis is log-expression.
|
At2g34640 Gene
