[←][→] ath   At2g34640 Gene
functional annotation
Function   plastid transcriptionally active 12    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0090228 [list] [network] positive regulation of red or far-red light signaling pathway  (1 genes)  IMP  
GO:0042793 [list] [network] plastid transcription  (13 genes)  IMP  
GO:0010218 [list] [network] response to far red light  (48 genes)  IEP  
GO:0010114 [list] [network] response to red light  (101 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (160 genes)  IEP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (9 genes)  IDA  
GO:0042644 [list] [network] chloroplast nucleoid  (43 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_181011.2 
BLAST NP_181011.2 
Orthologous [Ortholog page] LOC4325601 (osa)  LOC7470815 (ppo)  LOC11438320 (mtr)  LOC100798194 (gma)  LOC101055518 (sly)  LOC103867432 (bra)  LOC123062184 (tae)  LOC123070917 (tae)  LOC123079300 (tae)  LOC123444516 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_181011.2)
Subcellular
localization
TargetP
chlo 5  (predict for NP_181011.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PTAC12 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.0 FLN2 fructokinase-like protein [detail] 843251
16.6 PDE312 Nucleic acid-binding, OB-fold-like protein [detail] 824009
15.6 FLN1 fructokinase-like 1 [detail] 824576
13.1 RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein [detail] 820974
13.1 FTSH12 FTSH protease 12 [detail] 844294
12.1 TIC110 translocon at the inner envelope membrane of chloroplasts 110 [detail] 837205
11.9 EMB3144 AAA-type ATPase family protein [detail] 836579
11.8 EMB269 GTP1/OBG family protein [detail] 831975
11.8 AT5G66470 GTP-binding protein Era-like protein [detail] 836779
11.5 AT2G39670 Radical SAM superfamily protein [detail] 818550
11.5 PTAC3 plastid transcriptionally active 3 [detail] 819581
11.4 AT3G18680 Amino acid kinase family protein [detail] 821399
10.8 PRORP1 proteinaceous RNase P 1 [detail] 817782
10.7 FSD3 Fe superoxide dismutase 3 [detail] 832395
10.4 emb2746 RNA-metabolising metallo-beta-lactamase family protein [detail] 836461
9.0 OSB3 organellar single-stranded DNA binding protein 3 [detail] 834508
7.3 PAC pale cress protein (PAC) [detail] 819424
7.1 AT4G21770 Pseudouridine synthase family protein [detail] 828265
Coexpressed
gene list		 [Coexpressed gene list for PTAC12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266957_at
266957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266957_at
266957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266957_at
266957_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818029      
Refseq ID (protein) NP_181011.2 


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