ATTED-II : GeneID search result

[←][→] ath AT2G34840 Gene

functional annotation

Function

Coatomer epsilon subunit

GO BP

GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	(29 genes)	IEA
GO:0015031 [list] [network] protein transport	(724 genes)	IEA

GO CC

GO:0000139 [list] [network] Golgi membrane	(404 genes)	IEA
GO:0005829 [list] [network] cytosol	(3506 genes)	IDA

GO MF

GO:0005198 [list] [network] structural molecule activity

(369 genes)

IEA

KEGG

Protein

NP_001118443.1 NP_181030.1

BLAST

NP_001118443.1 NP_181030.1

Orthologous

[Ortholog page] LOC541811 (zma) COPE1 (gma) COPE2 (gma) AT1G30630 (ath) LOC4336967 (osa) LOC7485150 (ppo) LOC25486358 (mtr) LOC100264563 (vvi) LOC101245110 (sly) LOC101266095 (sly) LOC103840372 (bra) LOC103857552 (bra) LOC103865360 (bra)

Subcellular
localization
wolf

cyto 6, nucl 2, nucl_plas 2, extr 1, pero 1	(predict for NP_001118443.1)
nucl 5, cyto 2, cysk 1, cyto_pero 1	(predict for NP_181030.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001118443.1)
other 7	(predict for NP_181030.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath04141	Protein processing in endoplasmic reticulum	2

Genes directly connected with AT2G34840 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.0	AT2G29910	F-box/RNI-like superfamily protein	[detail]	817541
4.5	AT1G30630	Coatomer epsilon subunit	[detail]	839943
4.3	AT2G42485		[detail]	5007956

Coexpressed
gene list

[Coexpressed gene list for AT2G34840]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

267428_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

267428_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

267428_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818049
Refseq ID (protein)	NP_001118443.1
Refseq ID (protein)	NP_181030.1

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