ATTED-II : GeneID search result

[←][→] ath AT2G38120 Gene

functional annotation

Function

Transmembrane amino acid transporter family protein

GO BP

GO:0001736 [list] [network] establishment of planar polarity	(3 genes)	IGI
GO:0048829 [list] [network] root cap development	(15 genes)	IMP
GO:0009958 [list] [network] positive gravitropism	(36 genes)	IMP
GO:0003333 [list] [network] amino acid transmembrane transport	(53 genes)	IBA ISS
GO:0010311 [list] [network] lateral root formation	(55 genes)	IGI IMP
GO:0009926 [list] [network] auxin polar transport	(66 genes)	TAS
GO:0009624 [list] [network] response to nematode	(84 genes)	IEP
GO:0048765 [list] [network] root hair cell differentiation	(109 genes)	IGI
GO:0009734 [list] [network] auxin-activated signaling pathway	(196 genes)	IEA
GO:0009723 [list] [network] response to ethylene	(297 genes)	NAS
GO:0009733 [list] [network] response to auxin	(407 genes)	NAS

GO CC

GO:0009986 [list] [network] cell surface	(17 genes)	IDA
GO:0005768 [list] [network] endosome	(424 genes)	IDA
GO:0005794 [list] [network] Golgi apparatus	(1430 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IBA IDA ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

GO:0010011 [list] [network] auxin binding	(6 genes)	IDA
GO:0010328 [list] [network] auxin influx transmembrane transporter activity	(6 genes)	IDA
GO:0015171 [list] [network] amino acid transmembrane transporter activity	(77 genes)	IBA ISS
GO:0015293 [list] [network] symporter activity	(142 genes)	IEA

KEGG

ath04075 [list] [network] Plant hormone signal transduction (273 genes)

Protein

NP_001324970.1 NP_565882.1

BLAST

NP_001324970.1 NP_565882.1

Orthologous

[Ortholog page] LOC541998 (zma) LAX2 (ath) LAX1 (ath) LAX3 (ath) LOC4324749 (osa) LOC4332229 (osa) LOC4338948 (osa) LOC4348107 (osa) LOC4349885 (osa) LOC7460939 (ppo) LOC7466059 (ppo) LOC7470387 (ppo) LOC7472133 (ppo) LOC7487306 (ppo) LOC7488012 (ppo) LOC7490334 (ppo) LOC7495107 (ppo) LOC11406709 (mtr) LOC11407085 (mtr) LOC11411395 (mtr) LOC25492791 (mtr) LOC25494399 (mtr) LOC100233126 (vvi) LOC100243769 (vvi) LOC100253820 (vvi) LOC100267240 (vvi) LOC100284071 (zma) LOC100285200 (zma) LAX2 (sly) LAX3 (sly) LAX4 (sly) LAX1 (sly) LAX5 (sly) LAX9 (gma) LAX2 (gma) LAX3 (gma) LAX1 (gma) LAX5 (gma) LAX10 (gma) LAX7 (gma) LAX15 (gma) LAX12 (gma) LAX8 (gma) LAX6 (gma) LAX13 (gma) LOC103654551 (zma) LOC103830556 (bra) LOC103842560 (bra) LOC103847503 (bra) LOC103853090 (bra) LOC103857759 (bra) LOC103857897 (bra) LOC103858403 (bra) LOC103865653 (bra) AUX1 (bra)

Subcellular
localization
wolf

plas 6, chlo 1, nucl 1, cyto 1, vacu 1, cysk 1, cyto_nucl 1, cysk_nucl 1	(predict for NP_001324970.1)
plas 8, chlo 1	(predict for NP_565882.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001324970.1)
other 9	(predict for NP_565882.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5

Genes directly connected with AUX1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.3	WAT1	Walls Are Thin 1	[detail]	843886
8.1	PIN3	Auxin efflux carrier family protein	[detail]	843432
5.7	AT1G52190	Major facilitator superfamily protein	[detail]	841649
5.1	LAX1	like AUXIN RESISTANT 1	[detail]	831866

Coexpressed
gene list

[Coexpressed gene list for AUX1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

267092_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

267092_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

267092_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818390
Refseq ID (protein)	NP_001324970.1
Refseq ID (protein)	NP_565882.1

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