[←][→] ath   At2g38860 Gene
functional annotation
Function   Class I glutamine amidotransferase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009851 [list] [network] auxin biosynthetic process  (32 genes)  IEA  
GO:0065008 [list] [network] regulation of biological quality  (480 genes)  IEA  
GO:0014070 [list] [network] response to organic cyclic compound  (807 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath00620 [list] [network] Pyruvate metabolism (97 genes)
Protein NP_001118473.1  NP_030434.1  NP_850303.1 
BLAST NP_001118473.1  NP_030434.1  NP_850303.1 
Orthologous [Ortholog page] DJ1F (ath)  LOC4350819 (osa)  LOC103829987 (bra)  LOC103864103 (bra)  LOC123148912 (tae)  LOC123157367 (tae)  LOC123168374 (tae)  LOC123404979 (hvu)  LOC123411912 (hvu)  LOC123428708 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 1  (predict for NP_001118473.1)
cyto 7,  pero 2  (predict for NP_030434.1)
cyto 8,  pero 1  (predict for NP_850303.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_001118473.1)
scret 7  (predict for NP_030434.1)
scret 7  (predict for NP_850303.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 8
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
ath00380 Tryptophan metabolism 5
ath00966 Glucosinolate biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 5
Genes directly connected with YLS5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.2 TSA1 tryptophan synthase alpha chain [detail] 824629
15.4 AT2G04400 Aldolase-type TIM barrel family protein [detail] 814980
14.8 CYP83B1 cytochrome P450, family 83, subfamily B, polypeptide 1 [detail] 829277
11.4 TRP1 tryptophan biosynthesis 1 [detail] 831666
6.4 CYP71B6 cytochrome p450 71b6 [detail] 816952
6.4 AT5G53990 UDP-Glycosyltransferase superfamily protein [detail] 835482
Coexpressed
gene list		 [Coexpressed gene list for YLS5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266167_at
266167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266167_at
266167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266167_at
266167_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818470      
Refseq ID (protein) NP_001118473.1 
NP_030434.1 
NP_850303.1 


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