[←][→] ath   At2g39250 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA TAS  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM TAS  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  TAS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IEA ISS TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001325386.1  NP_850313.2 
BLAST NP_001325386.1  NP_850313.2 
Orthologous
Subcellular
localization
wolf
nucl 6,  cyto 1,  extr 1  (predict for NP_001325386.1)
cysk 4,  cyto 4,  nucl 2,  cysk_plas 2  (predict for NP_850313.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001325386.1)
other 9  (predict for NP_850313.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with SNZ on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 SQS2 squalene synthase 2 [detail] 829617
5.4 AT1G18810 phytochrome kinase substrate-like protein [detail] 838463
5.1 AT2G22200 Integrase-type DNA-binding superfamily protein [detail] 816754
4.1 AT5G15240 Transmembrane amino acid transporter family protein [detail] 831376
Coexpressed
gene list		 [Coexpressed gene list for SNZ]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267010_at
267010_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267010_at
267010_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267010_at
267010_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818510      
Refseq ID (protein) NP_001325386.1 
NP_850313.2 


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