ATTED-II : GeneID search result

[←][→] ath AT2G39250 Gene

functional annotation

Function

Integrase-type DNA-binding superfamily protein

GO BP

GO:0009873 [list] [network] ethylene-activated signaling pathway	(191 genes)	IEA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA TAS

GO CC

GO:0005730 [list] [network] nucleolus	(477 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA ISM TAS

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS TAS
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA TAS

KEGG

Protein

NP_001325386.1 NP_850313.2

BLAST

NP_001325386.1 NP_850313.2

Orthologous

Subcellular
localization
wolf

nucl 6, cyto 1, extr 1	(predict for NP_001325386.1)
cysk 4, cyto 4, nucl 2, cysk_plas 2	(predict for NP_850313.2)

Subcellular
localization
TargetP

other 9	(predict for NP_001325386.1)
other 9	(predict for NP_850313.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SNZ on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.7	AT1G18810	phytochrome kinase substrate-like protein	[detail]	838463
5.2	CDF1	cycling DOF factor 1	[detail]	836364
5.1	SQS2	squalene synthase 2	[detail]	829617
4.3	AT2G22200	Integrase-type DNA-binding superfamily protein	[detail]	816754

Coexpressed
gene list

[Coexpressed gene list for SNZ]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

267010_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

267010_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

267010_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818510
Refseq ID (protein)	NP_001325386.1
Refseq ID (protein)	NP_850313.2

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