[←][→] ath   AT2G39340 Gene
functional annotation
Function   SAC3/GANP/Nin1/mts3/eIF-3 p25 family  
GO BP
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (11 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
KEGG
Protein NP_181466.2 
BLAST NP_181466.2 
Orthologous [Ortholog page] LOC4327459 (osa)  LOC7457903 (ppo)  LOC7489613 (ppo)  LOC9270017 (osa)  LOC11419986 (mtr)  LOC100258656 (vvi)  LOC100279473 (zma)  LOC100778996 (gma)  LOC100804185 (gma)  LOC101254205 (sly)  LOC103635767 (zma)  LOC103865711 (bra)  LOC103867050 (bra)  LOC103867052 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_181466.2)
Subcellular
localization
TargetP
other 8  (predict for NP_181466.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with SAC3A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 SUA suppressor of abi3-5 [detail] 824590
8.3 AT1G70620 cyclin-like protein [detail] 843399
8.0 AT1G50410 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein [detail] 841463
7.3 AT2G01460 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 814674
7.2 AT1G79740 hAT transposon superfamily [detail] 844313
7.1 AT1G79020 Enhancer of polycomb-like transcription factor protein [detail] 844243
7.0 ATX2 trithorax-like protein 2 [detail] 837093
6.9 AT3G13225 WW domain-containing protein [detail] 820517
6.8 AME3 Protein kinase superfamily protein [detail] 829401
6.6 DCL1 dicer-like 1 [detail] 839574
6.4 CLC-D chloride channel D [detail] 832693
6.3 AT5G04090 histidine-tRNA ligase [detail] 830288
6.1 AT5G55600 Agenet and bromo-adjacent homology (BAH) domain-containing protein [detail] 835654
5.7 WNK5 with no lysine (K) kinase 5 [detail] 824326
4.8 MPK18 mitogen-activated protein kinase 18 [detail] 841786
4.4 MEE29 helicase domain-containing protein [detail] 818101
Coexpressed
gene list		 [Coexpressed gene list for SAC3A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267015_at
267015_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267015_at
267015_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267015_at
267015_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818519      
Refseq ID (protein) NP_181466.2 


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