[←][→] ath   AT2G39670 Gene
functional annotation
Function   Radical SAM superfamily protein  
GO BP
GO:0070475 [list] [network] rRNA base methylation  (16 genes)  IEA  
GO:0030488 [list] [network] tRNA methylation  (26 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (51 genes)  IEA  
GO:0051536 [list] [network] iron-sulfur cluster binding  (145 genes)  IEA  
KEGG
Protein NP_565909.1  NP_850319.1 
BLAST NP_565909.1  NP_850319.1 
Orthologous [Ortholog page] LOC4326401 (osa)  LOC7467549 (ppo)  LOC11427515 (mtr)  LOC100193530 (zma)  LOC100241081 (vvi)  LOC100801657 (gma)  LOC100818638 (gma)  LOC101253790 (sly)  LOC103867024 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_565909.1)
chlo 10  (predict for NP_850319.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_565909.1)
chlo 4  (predict for NP_850319.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G39670 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.0 FLN2 fructokinase-like protein [detail] 843251
11.0 PTAC12 plastid transcriptionally active 12 [detail] 818029
10.9 RH39 RH39 [detail] 826559
10.9 AT4G09040 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 826483
10.8 RHON1 Rho termination factor [detail] 837128
9.1 EMB3129 GTP-binding family protein [detail] 828174
9.0 EMB1586 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 837833
8.6 AT4G26370 antitermination NusB domain-containing protein [detail] 828743
8.4 AT5G11480 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 831019
7.3 AT5G02710 zinc/iron-chelating domain protein [detail] 831827
6.2 AT1G76050 Pseudouridine synthase family protein [detail] 843937
5.5 AT4G21770 Pseudouridine synthase family protein [detail] 828265
Coexpressed
gene list		 [Coexpressed gene list for AT2G39670]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267562_at
267562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267562_at
267562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267562_at
267562_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818550      
Refseq ID (protein) NP_565909.1 
NP_850319.1 


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