[←][→] ath   At2g39730 Gene
functional annotation
Function   rubisco activase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (37 genes)  IDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM NAS  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0046863 [list] [network] ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity  (1 genes)  IDA  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (164 genes)  IDA  
GO:0030234 [list] [network] enzyme regulator activity  (207 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (253 genes)  IDA IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_565913.1  NP_850320.1  NP_850321.1 
BLAST NP_565913.1  NP_850320.1  NP_850321.1 
Orthologous [Ortholog page] LOC542853 (tae)  LOC732707 (tae)  LOC4351224 (osa)  LOC7458129 (ppo)  LOC7468818 (ppo)  LOC7487971 (ppo)  LOC11412610 (mtr)  LOC11442149 (mtr)  LOC25489329 (mtr)  RCA14 (gma)  RCA03 (gma)  RCABETA (gma)  RCAALPHA (gma)  RCA11 (gma)  LOC101249777 (sly)  LOC101250725 (sly)  LOC103857877 (bra)  RCA (bra)  LOC103867016 (bra)  LOC123086288 (tae)  LOC123091750 (tae)  LOC123091751 (tae)  LOC123096736 (tae)  LOC123448238 (hvu)  LOC123448239 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_565913.1)
chlo 10  (predict for NP_850320.1)
chlo 10  (predict for NP_850321.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_565913.1)
chlo 8  (predict for NP_850320.1)
chlo 8  (predict for NP_850321.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation in photosynthetic organisms 10
ath01200 Carbon metabolism 10
ath00195 Photosynthesis 6
ath01230 Biosynthesis of amino acids 3
ath00010 Glycolysis / Gluconeogenesis 3
Genes directly connected with RCA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.3 FBA2 fructose-bisphosphate aldolase 2 [detail] 830052
14.1 GAPB glyceraldehyde-3-phosphate dehydrogenase B subunit [detail] 840895
12.6 PETC photosynthetic electron transfer C [detail] 827996
11.4 GGT1 glutamate:glyoxylate aminotransferase [detail] 838940
8.5 AOR Oxidoreductase, zinc-binding dehydrogenase family protein [detail] 838984
6.3 CDSP32 chloroplastic drought-induced stress protein of 32 kD [detail] 843940
Coexpressed
gene list		 [Coexpressed gene list for RCA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245061_at
245061_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245061_at
245061_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245061_at
245061_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818558      
Refseq ID (protein) NP_565913.1 
NP_850320.1 
NP_850321.1 


The preparation time of this page was 0.5 [sec].