[←][→] ath   AT2G39810 Gene
functional annotation
Function   ubiquitin-protein ligase  
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324757.1  NP_181511.3 
BLAST NP_001324757.1  NP_181511.3 
Orthologous [Ortholog page] LOC7471642 (ppo)  LOC9270217 (osa)  LOC11435603 (mtr)  LOC100241255 (vvi)  LOC100736471 (sly)  LOC100779024 (gma)  LOC100790851 (gma)  LOC103625902 (zma)  LOC103645598 (zma)  LOC103865748 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  vacu 1,  chlo 1,  pero 1,  E.R._vacu 1  (predict for NP_001324757.1)
nucl 9  (predict for NP_181511.3)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001324757.1)
other 5,  chlo 4  (predict for NP_181511.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03018 RNA degradation 3
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with HOS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 XRN2 exoribonuclease 2 [detail] 834261
6.5 AT1G06900 Insulinase (Peptidase family M16) family protein [detail] 837200
6.4 EIF3A eukaryotic translation initiation factor 3A [detail] 826746
Coexpressed
gene list		 [Coexpressed gene list for HOS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245120_at
245120_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245120_at
245120_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245120_at
245120_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818568      
Refseq ID (protein) NP_001324757.1 
NP_181511.3 


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