[←][→] ath   AT2G40100 Gene
functional annotation
Function   light harvesting complex photosystem II  
GO BP
GO:0018298 [list] [network] protein-chromophore linkage  (38 genes)  IEA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IEP  
GO:0010114 [list] [network] response to red light  (74 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (98 genes)  IEP  
GO CC
GO:0009522 [list] [network] photosystem I  (35 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (52 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (27 genes)  IEA ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_001189719.1  NP_181539.1 
BLAST NP_001189719.1  NP_181539.1 
Orthologous [Ortholog page] LOC542478 (zma)  LHCB4.2 (ath)  LHCB4.1 (ath)  LOC4343583 (osa)  LOC7466067 (ppo)  LOC7487313 (ppo)  LOC7488015 (ppo)  LOC11422473 (mtr)  LOC100216729 (zma)  LOC100266604 (vvi)  LOC100785180 (gma)  LOC100785415 (gma)  LOC100794604 (gma)  LOC100820335 (gma)  LOC101249002 (sly)  LOC103850412 (bra)  LOC103866983 (bra)  LOC103870577 (bra) 
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for NP_001189719.1)
chlo 4,  plas 4,  golg_plas 3,  golg 1  (predict for NP_181539.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001189719.1)
chlo 7  (predict for NP_181539.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 4
ath00910 Nitrogen metabolism 3
ath01230 Biosynthesis of amino acids 3
Genes directly connected with LHCB4.3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 MES18 methyl esterase 18 [detail] 835943
6.0 AT1G16080 nuclear protein [detail] 838178
5.6 CRB chloroplast RNA binding protein [detail] 837455
Coexpressed
gene list		 [Coexpressed gene list for LHCB4.3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265722_at
265722_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265722_at
265722_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265722_at
265722_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818599      
Refseq ID (protein) NP_001189719.1 
NP_181539.1 


The preparation time of this page was 0.2 [sec].