[←][→] ath   At2g40490 Gene
functional annotation
Function   Uroporphyrinogen decarboxylase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (9 genes)  IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IEA  
GO:0031329 [list] [network] regulation of cellular catabolic process  (69 genes)  IEA  
GO:0015994 [list] [network] chlorophyll metabolic process  (122 genes)  IEA  
GO:0046700 [list] [network] heterocycle catabolic process  (123 genes)  IEA  
GO:0044270 [list] [network] cellular nitrogen compound catabolic process  (124 genes)  IEA  
GO:0019439 [list] [network] aromatic compound catabolic process  (137 genes)  IEA  
GO:1901361 [list] [network] organic cyclic compound catabolic process  (149 genes)  IEA  
GO:0042440 [list] [network] pigment metabolic process  (230 genes)  IEA  
GO:0048827 [list] [network] phyllome development  (732 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0004853 [list] [network] uroporphyrinogen decarboxylase activity  (2 genes)  IEA  
KEGG ath00860 [list] [network] Porphyrin metabolism (53 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_181581.1 
BLAST NP_181581.1 
Orthologous [Ortholog page] LOC4332771 (osa)  LOC7453573 (ppo)  LOC11419047 (mtr)  LOC100800753 (gma)  LOC100817154 (gma)  LOC101250511 (sly)  LOC103865812 (bra)  LOC112325695 (ppo)  LOC123085806 (tae)  LOC123092198 (tae)  LOC123097534 (tae)  LOC123448678 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_181581.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_181581.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 8
ath03010 Ribosome 3
Genes directly connected with HEME2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.7 HEMC hydroxymethylbilane synthase [detail] 830724
11.6 HEME1 Uroporphyrinogen decarboxylase [detail] 820722
11.2 GSA2 glutamate-1-semialdehyde 2,1-aminomutase 2 [detail] 824034
9.1 PPOX Flavin containing amine oxidoreductase family [detail] 827991
7.4 PPD1 Photosystem II reaction center PsbP family protein [detail] 827223
Coexpressed
gene list		 [Coexpressed gene list for HEME2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255826_at
255826_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255826_at
255826_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255826_at
255826_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818644      
Refseq ID (protein) NP_181581.1 


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