[←][→] ath   AT2G40650 Gene
functional annotation
Function   PRP38 family protein  
GO BP
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (1 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_565937.1 
BLAST NP_565937.1 
Orthologous [Ortholog page] LOC4346374 (osa)  LOC11407187 (mtr)  LOC100266508 (vvi)  LOC100284891 (zma)  LOC100792466 (gma)  LOC100794094 (gma)  LOC101263250 (sly)  LOC103857945 (bra)  LOC103865826 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_plas 2  (predict for NP_565937.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_565937.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT2G40650 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 AT5G53800 nucleic acid-binding protein [detail] 835461
9.7 AT5G14440 Surfeit locus protein 2 (SURF2) [detail] 831295
9.6 CYP59 cyclophilin 59 [detail] 841810
7.5 AT5G37350 Serine/threonine-protein kinase Rio1 [detail] 833709
7.3 TWD1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein [detail] 821718
7.3 AT1G11240 ribosomal RNA-processing protein [detail] 837665
5.7 AT3G05760 C2H2 and C2HC zinc fingers superfamily protein [detail] 819745
Coexpressed
gene list		 [Coexpressed gene list for AT2G40650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266055_at
266055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266055_at
266055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266055_at
266055_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818660      
Refseq ID (protein) NP_565937.1 


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