[←][→] ath   At2g40650 Gene
functional annotation
Function   PRP38 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008380 [list] [network] RNA splicing  (191 genes)  IEA  
GO:2000026 [list] [network] regulation of multicellular organismal development  (499 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_565937.1 
BLAST NP_565937.1 
Orthologous [Ortholog page] LOC780656 (tae)  LOC4346374 (osa)  LOC11407187 (mtr)  LOC18104015 (ppo)  LOC100792466 (gma)  LOC100794094 (gma)  LOC101263250 (sly)  LOC103857945 (bra)  LOC103865826 (bra)  LOC123120611 (tae)  LOC123399116 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_plas 2  (predict for NP_565937.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_565937.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT2G40650 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.1 AT5G53800 nucleic acid-binding protein [detail] 835461
10.1 CYP59 cyclophilin 59 [detail] 841810
9.4 AT4G08310 DNA ligase [detail] 826385
8.1 TAF15 TBP-associated factor 15 [detail] 841452
7.5 TWD1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein [detail] 821718
7.1 AT5G37350 Serine/threonine-protein kinase Rio1 [detail] 833709
5.9 CDPK19 calcium-dependent protein kinase 19 [detail] 832065
Coexpressed
gene list		 [Coexpressed gene list for AT2G40650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266055_at
266055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266055_at
266055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266055_at
266055_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818660      
Refseq ID (protein) NP_565937.1 


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