[←][→] ath   AT2G40750 Gene
functional annotation
Function   WRKY DNA-binding protein 54  
GO BP
GO:1900056 [list] [network] negative regulation of leaf senescence  (10 genes)  IGI  
GO:1900457 [list] [network] regulation of brassinosteroid mediated signaling pathway  (19 genes)  IMP  
GO:2000031 [list] [network] regulation of salicylic acid mediated signaling pathway  (23 genes)  IMP  
GO:0010104 [list] [network] regulation of ethylene-activated signaling pathway  (24 genes)  IMP  
GO:0090333 [list] [network] regulation of stomatal closure  (26 genes)  IMP  
GO:2000070 [list] [network] regulation of response to water deprivation  (31 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (34 genes)  IMP  
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (36 genes)  IMP  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (82 genes)  IEA  
GO:0000302 [list] [network] response to reactive oxygen species  (152 genes)  IEP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0031347 [list] [network] regulation of defense response  (260 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IBA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA IMP ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_181607.1 
BLAST NP_181607.1 
Orthologous [Ortholog page] WRKY70 (ath)  LOC4332680 (osa)  LOC4349610 (osa)  LOC7482601 (ppo)  LOC7484630 (ppo)  LOC7497365 (ppo)  LOC9269857 (osa)  LOC11405706 (mtr)  LOC11406224 (mtr)  LOC11406834 (mtr)  LOC11413372 (mtr)  LOC11424834 (mtr)  LOC11427261 (mtr)  LOC11436576 (mtr)  LOC11442088 (mtr)  LOC25479396 (mtr)  LOC25489818 (mtr)  LOC25500948 (mtr)  WRKY57 (gma)  WRKY58 (gma)  LOC100192722 (zma)  LOC100255013 (vvi)  LOC100258754 (vvi)  LOC100280812 (zma)  LOC100281426 (zma)  WRKY76 (gma)  LOC100792193 (gma)  LOC100796071 (gma)  LOC100796599 (gma)  LOC100797129 (gma)  LOC100805895 (gma)  LOC100811812 (gma)  WRKY80 (sly)  WRKY81 (sly)  LOC102659367 (gma)  LOC102663141 (gma)  LOC102663281 (gma)  LOC102670495 (gma)  LOC103647154 (zma)  LOC103651063 (zma)  LOC103651065 (zma)  LOC103654285 (zma)  WRKY70 (bra)  WRKY67 (bra)  LOC103857951 (bra)  LOC103865830 (bra)  LOC103866516 (bra)  LOC107276287 (osa)  LOC107276640 (osa)  LOC107277470 (osa)  LOC107279019 (osa)  LOC107279783 (osa)  LOC109617030 (zma) 
Subcellular
localization
wolf
nucl 9,  plas 1,  golg_plas 1  (predict for NP_181607.1)
Subcellular
localization
TargetP
other 6  (predict for NP_181607.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with WRKY54 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.9 WRKY70 WRKY DNA-binding protein 70 [detail] 824807
14.4 NIMIN1 NIM1-interacting 1 [detail] 837800
11.6 AT1G19960 transcription factor [detail] 838585
10.6 NIMIN-2 NIM1-interacting 2 [detail] 822184
10.3 WRKY38 WRKY DNA-binding protein 38 [detail] 832320
9.5 SIB1 sigma factor binding protein 1 [detail] 824838
8.8 NPR4 NPR1-like protein 4 [detail] 827710
8.2 NAC004 NAC domain containing protein 4 [detail] 837630
7.3 AT5G03350 Legume lectin family protein [detail] 831863
6.1 DMR6 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 832524
5.7 WRKY62 WRKY DNA-binding protein 62 [detail] 831826
5.7 AT1G13750 Purple acid phosphatases superfamily protein [detail] 837935
Coexpressed
gene list		 [Coexpressed gene list for WRKY54]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257382_at
257382_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257382_at
257382_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257382_at
257382_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818670      
Refseq ID (protein) NP_181607.1 


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