ATTED-II : GeneID search result

[←][→] ath AT2G40810 Gene

functional annotation

Function

autophagy-like protein

GO BP

GO:0034497 [list] [network] protein localization to phagophore assembly site	(5 genes)	IBA
GO:0000422 [list] [network] autophagy of mitochondrion	(12 genes)	IBA
GO:0000045 [list] [network] autophagosome assembly	(19 genes)	IBA
GO:0006497 [list] [network] protein lipidation	(51 genes)	IBA
GO:0015031 [list] [network] protein transport	(724 genes)	IEA

GO CC

GO:0034045 [list] [network] phagophore assembly site membrane	(9 genes)	IBA
GO:0019898 [list] [network] extrinsic component of membrane	(62 genes)	IBA
GO:0005774 [list] [network] vacuolar membrane	(624 genes)	IEA
GO:0005829 [list] [network] cytosol	(3506 genes)	IBA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0080025 [list] [network] phosphatidylinositol-3,5-bisphosphate binding	(5 genes)	IBA
GO:0032266 [list] [network] phosphatidylinositol-3-phosphate binding	(6 genes)	IBA

KEGG

Protein

NP_001324652.1 NP_181613.2 NP_973650.1

BLAST

NP_001324652.1 NP_181613.2 NP_973650.1

Orthologous

[Ortholog page] ATG18D (ath) LOC4325192 (osa) LOC25489798 (mtr) LOC100248334 (vvi) LOC100501577 (zma) LOC100501634 (zma) LOC100817169 (gma) LOC100817377 (gma) LOC101246636 (sly) LOC103841551 (bra) LOC103865844 (bra)

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, extr 1, vacu 1, chlo_mito 1	(predict for NP_001324652.1)
nucl 5, chlo 2, cyto 1, extr 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_181613.2)
nucl 5, chlo 2, cyto 1, extr 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_973650.1)

Subcellular
localization
TargetP

other 5	(predict for NP_001324652.1)
other 5, chlo 3	(predict for NP_181613.2)
other 5, chlo 3	(predict for NP_973650.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with ATG18C on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.4	PEPKR2	phosphoenolpyruvate carboxylase-related kinase 2	[detail]	837824
6.1	AT5G15710	Galactose oxidase/kelch repeat superfamily protein	[detail]	831425
6.1	AT3G43230	RING/FYVE/PHD-type zinc finger family protein	[detail]	823398
5.8	ATG18D	autophagy 18 D-like protein	[detail]	824811

Coexpressed
gene list

[Coexpressed gene list for ATG18C]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266056_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266056_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266056_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818678
Refseq ID (protein)	NP_001324652.1
	NP_181613.2
	NP_973650.1

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