[←][→] ath   AT2G40830 Gene
functional annotation
Function   RING-H2 finger C1A  
GO BP
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway  (15 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IDA  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IDA IEA  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324188.1  NP_565942.1  NP_973651.1  NP_973652.1 
BLAST NP_001324188.1  NP_565942.1  NP_973651.1  NP_973652.1 
Orthologous [Ortholog page] AT3G56580 (ath)  LOC4332849 (osa)  LOC7458900 (ppo)  LOC7495674 (ppo)  LOC11431832 (mtr)  LOC25480121 (mtr)  LOC25483287 (mtr)  LOC100251284 (vvi)  LOC100265395 (vvi)  LOC100283413 (zma)  LOC100787242 (gma)  LOC100787523 (gma)  LOC100813674 (gma)  LOC100819514 (gma)  LOC101254413 (sly)  LOC103841559 (bra)  LOC103857956 (bra)  LOC103866521 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  mito 2  (predict for NP_001324188.1)
nucl 6,  cyto_nucl 4,  mito 2  (predict for NP_565942.1)
nucl 6,  cyto_nucl 4,  mito 2  (predict for NP_973651.1)
nucl 6,  cyto_nucl 4,  mito 2  (predict for NP_973652.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001324188.1)
mito 7  (predict for NP_565942.1)
mito 7  (predict for NP_973651.1)
mito 7  (predict for NP_973652.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath00513 Various types of N-glycan biosynthesis 2
Genes directly connected with RHC1A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 FUT12 fucosyltransferase 12 [detail] 841394
5.9 AT1G09520 hypothetical protein [detail] 837478
5.7 AT3G22270 Topoisomerase II-associated protein PAT1 [detail] 821797
4.9 AT4G34480 O-Glycosyl hydrolases family 17 protein [detail] 829599
Coexpressed
gene list		 [Coexpressed gene list for RHC1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245099_at
245099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245099_at
245099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245099_at
245099_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818680      
Refseq ID (protein) NP_001324188.1 
NP_565942.1 
NP_973651.1 
NP_973652.1 


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