[][] ath   AT2G40930 Gene
functional annotation
Function   ubiquitin-specific protease 5
GO BP
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM ISS  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IDA IEA  
KEGG
Protein NP_001323724.1  NP_565944.1 
BLAST NP_001323724.1  NP_565944.1 
Orthologous [Ortholog page] LOC4350498 (osa)LOC11408935 (mtr)LOC100258589 (vvi)LOC100785944 (gma)LOC100794067 (gma)LOC101246751 (sly)LOC103646933 (zma)LOC103865851 (bra)
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1,  golg 1  (predict for NP_001323724.1)
nucl 6,  cyto 2,  cysk 1,  golg 1  (predict for NP_565944.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001323724.1)
other 8,  chlo 3  (predict for NP_565944.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with UBP5 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.1 emb1967 Forkhead-associated (FHA) domain-containing protein [detail] 824602
7.8 AT1G11060 WAPL (Wings apart-like protein regulation of heterochromatin) protein [detail] 837647
6.9 AT4G36080 phosphotransferases/inositol or phosphatidylinositol kinase [detail] 829764
6.8 ADA2A ADA2 2A [detail] 819965
6.5 JMJ14 JUMONJI 14 [detail] 827788
Coexpressed
gene list
[Coexpressed gene list for UBP5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245100_at
245100_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245100_at
245100_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245100_at
245100_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 818691    
Refseq ID (protein) NP_001323724.1 
NP_565944.1 


The preparation time of this page was 0.2 [sec].