functional annotation |
Function |
Calcium-binding EF hand family protein |
|
GO BP |
GO:0009652 [list] [network] thigmotropism
|
(6 genes)
|
IEP
|
|
GO:0009612 [list] [network] response to mechanical stimulus
|
(20 genes)
|
IEP
|
|
GO:0009646 [list] [network] response to absence of light
|
(45 genes)
|
IEP
|
|
GO:0071456 [list] [network] cellular response to hypoxia
|
(238 genes)
|
HEP
|
|
GO:0009266 [list] [network] response to temperature stimulus
|
(608 genes)
|
NAS
|
|
|
GO CC |
|
GO MF |
|
KEGG |
ath04626 [list] [network] Plant-pathogen interaction (170 genes) |
|
Protein |
NP_001031523.1
NP_001189723.1
NP_001318399.1
NP_001318400.1
NP_001324805.1
NP_001324806.1
NP_181643.1
|
BLAST |
NP_001031523.1
NP_001189723.1
NP_001318399.1
NP_001318400.1
NP_001324805.1
NP_001324806.1
NP_181643.1
|
Orthologous |
|
Subcellular localization wolf |
cyto 4,
nucl 3,
cyto_plas 3
|
(predict for NP_001031523.1)
|
nucl 6,
cyto_nucl 4,
cyto 1
|
(predict for NP_001189723.1)
|
nucl 5,
cyto 4,
chlo 1,
plas 1
|
(predict for NP_001318399.1)
|
cyto 4,
nucl 3,
cyto_plas 3
|
(predict for NP_001318400.1)
|
cyto_nucl 4,
nucl 3,
cyto 3,
chlo 1,
extr 1
|
(predict for NP_001324805.1)
|
cyto 4,
nucl 3,
cyto_plas 3
|
(predict for NP_001324806.1)
|
nucl 6,
cyto_nucl 4,
cyto 1
|
(predict for NP_181643.1)
|
|
Subcellular localization TargetP |
other 9
|
(predict for NP_001031523.1)
|
other 9
|
(predict for NP_001189723.1)
|
other 8
|
(predict for NP_001318399.1)
|
other 9
|
(predict for NP_001318400.1)
|
other 9
|
(predict for NP_001324805.1)
|
other 9
|
(predict for NP_001324806.1)
|
other 9
|
(predict for NP_181643.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath04626 |
Plant-pathogen interaction |
3 |
|
ath04016 |
MAPK signaling pathway - plant |
2 |
|
Genes directly connected with TCH3 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
13.3 |
NUDT7 |
MutT/nudix family protein |
[detail] |
826884 |
9.1 |
AT2G24600 |
Ankyrin repeat family protein |
[detail] |
816996 |
8.5 |
WRKY33 |
WRKY DNA-binding protein 33 |
[detail] |
818429 |
8.4 |
ERD6 |
Major facilitator superfamily protein |
[detail] |
837414 |
8.3 |
AT1G69840 |
SPFH/Band 7/PHB domain-containing membrane-associated protein family |
[detail] |
843320 |
6.5 |
AT1G19380 |
sugar, putative (DUF1195) |
[detail] |
838521 |
5.5 |
AT4G18253 |
receptor Serine/Threonine kinase-like protein |
[detail] |
28720145 |
4.8 |
AT5G54710 |
Ankyrin repeat family protein |
[detail] |
835560 |
|
Coexpressed gene list |
[Coexpressed gene list for TCH3]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
267083_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
267083_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
267083_at
X axis is samples (xls file), and Y axis is log-expression.
|