[←][→] ath   At2g41100 Gene
functional annotation
Function   Calcium-binding EF hand family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009652 [list] [network] thigmotropism  (6 genes)  IEP  
GO:0009612 [list] [network] response to mechanical stimulus  (22 genes)  IEP  
GO:0009646 [list] [network] response to absence of light  (50 genes)  IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009266 [list] [network] response to temperature stimulus  (843 genes)  NAS  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (132 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04626 [list] [network] Plant-pathogen interaction (204 genes)
Protein NP_001031523.1  NP_001189723.1  NP_001318399.1  NP_001318400.1  NP_001324805.1  NP_001324806.1  NP_181643.1 
BLAST NP_001031523.1  NP_001189723.1  NP_001318399.1  NP_001318400.1  NP_001324805.1  NP_001324806.1  NP_181643.1 
Orthologous
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_plas 3  (predict for NP_001031523.1)
nucl 6,  cyto_nucl 4,  cyto 1  (predict for NP_001189723.1)
nucl 5,  cyto 4,  chlo 1,  plas 1  (predict for NP_001318399.1)
cyto 4,  nucl 3,  cyto_plas 3  (predict for NP_001318400.1)
cyto_nucl 4,  nucl 3,  cyto 3,  chlo 1,  extr 1  (predict for NP_001324805.1)
cyto 4,  nucl 3,  cyto_plas 3  (predict for NP_001324806.1)
nucl 6,  cyto_nucl 4,  cyto 1  (predict for NP_181643.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001031523.1)
other 9  (predict for NP_001189723.1)
other 8  (predict for NP_001318399.1)
other 9  (predict for NP_001318400.1)
other 9  (predict for NP_001324805.1)
other 9  (predict for NP_001324806.1)
other 9  (predict for NP_181643.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
Genes directly connected with TCH3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.1 NUDT7 MutT/nudix family protein [detail] 826884
9.8 AT2G24600 Ankyrin repeat family protein [detail] 816996
9.0 XBAT34 uncharacterized protein [detail] 827080
8.3 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated protein family [detail] 843320
7.3 AT5G54710 Ankyrin repeat family protein [detail] 835560
Coexpressed
gene list		 [Coexpressed gene list for TCH3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267083_at
267083_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267083_at
267083_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267083_at
267083_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818709      
Refseq ID (protein) NP_001031523.1 
NP_001189723.1 
NP_001318399.1 
NP_001318400.1 
NP_001324805.1 
NP_001324806.1 
NP_181643.1 


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