[←][→] ath   AT2G41340 Gene
functional annotation
Function   RNA polymerase II fifth largest subunit, D  
GO BP
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (15 genes)  IDA  
GO:0000419 [list] [network] RNA polymerase V complex  (21 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001055 [list] [network] RNA polymerase II activity  (19 genes)  IBA  
GO:0001054 [list] [network] RNA polymerase I activity  (20 genes)  IBA  
GO:0001056 [list] [network] RNA polymerase III activity  (24 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_001324725.1  NP_001324726.1  NP_181665.1 
BLAST NP_001324725.1  NP_001324726.1  NP_181665.1 
Orthologous [Ortholog page] RPB5E (ath)  NRPE5 (ath)  LOC4349748 (osa)  LOC4351463 (osa)  LOC7458931 (ppo)  LOC7487012 (ppo)  LOC11419143 (mtr)  LOC100273995 (zma)  LOC100306033 (gma)  LOC100799908 (gma)  LOC100805412 (gma)  LOC100853213 (vvi)  LOC101252227 (sly)  LOC101255881 (sly)  LOC102670224 (gma)  LOC103841615 (bra)  LOC103863227 (bra)  LOC103865879 (bra) 
Subcellular
localization
wolf
cyto 5,  extr 2,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_001324725.1)
cyto 4,  nucl 2,  extr 2,  cyto_E.R. 2  (predict for NP_001324726.1)
cyto 4,  nucl 3,  extr 2,  chlo 1,  cysk 1  (predict for NP_181665.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001324725.1)
other 9  (predict for NP_001324726.1)
other 9  (predict for NP_181665.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
Genes directly connected with RPB5D on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 HB33 homeobox protein 33 [detail] 843861
6.0 EPF2 Putative membrane lipoprotein [detail] 840324
5.8 HB31 homeobox protein 31 [detail] 838006
3.6 AT2G42170 Actin family protein [detail] 818817
Coexpressed
gene list		 [Coexpressed gene list for RPB5D]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266423_at
266423_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266423_at
266423_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266423_at
266423_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818732      
Refseq ID (protein) NP_001324725.1 
NP_001324726.1 
NP_181665.1 


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