[←][→] ath   AT2G41460 Gene
functional annotation
Function   apurinic endonuclease-redox protein  
GO BP
GO:0033683 [list] [network] nucleotide-excision repair, DNA incision  (7 genes)  IDA  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  TAS  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (44 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004528 [list] [network] phosphodiesterase I activity  (4 genes)  IDA  
GO:0140078 [list] [network] class I DNA-(apurinic or apyrimidinic site) endonuclease activity  (5 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (13 genes)  IDA  
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IDA  
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IEA  
GO:0016791 [list] [network] phosphatase activity  (318 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03410 [list] [network] Base excision repair (43 genes)
Protein NP_001118500.1  NP_001323447.1  NP_001323448.1  NP_181677.1 
BLAST NP_001118500.1  NP_001323447.1  NP_001323448.1  NP_181677.1 
Orthologous [Ortholog page] LOC4327960 (osa)  LOC4327961 (osa)  LOC7458951 (ppo)  LOC25483315 (mtr)  LOC100191243 (zma)  LOC100257338 (vvi)  LOC100280514 (zma)  LOC100776653 (gma)  LOC101255875 (sly)  LOC103860053 (bra)  LOC103866025 (bra) 
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_001118500.1)
chlo 8,  nucl 1  (predict for NP_001323447.1)
nucl 6,  cyto_nucl 4,  mito 1,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001323448.1)
chlo 8,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_181677.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001118500.1)
chlo 4  (predict for NP_001323447.1)
other 7  (predict for NP_001323448.1)
mito 3  (predict for NP_181677.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03420 Nucleotide excision repair 6
ath03410 Base excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 3
Genes directly connected with ARP on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836267
5.8 EMB2775 ATPase family associated with various cellular activities (AAA) [detail] 832836
5.7 HAG2 histone acetyltransferase of the GNAT family 2 [detail] 835775
Coexpressed
gene list		 [Coexpressed gene list for ARP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267099_at
267099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267099_at
267099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267099_at
267099_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818744      
Refseq ID (protein) NP_001118500.1 
NP_001323447.1 
NP_001323448.1 
NP_181677.1 


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