[←][→] ath   At2g41460 Gene
functional annotation
Function   apurinic endonuclease-redox protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (17 genes)  IDA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  TAS  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (43 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004528 [list] [network] phosphodiesterase I activity  (2 genes)  IDA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (5 genes)  IDA  
GO:0008408 [list] [network] 3'-5' exonuclease activity  (18 genes)  IDA  
GO:0016791 [list] [network] phosphatase activity  (224 genes)  IDA  
KEGG ath03410 [list] [network] Base excision repair (41 genes)
Protein NP_001118500.1  NP_001323447.1  NP_001323448.1  NP_181677.1 
BLAST NP_001118500.1  NP_001323447.1  NP_001323448.1  NP_181677.1 
Orthologous [Ortholog page] LOC4327960 (osa)  LOC4327961 (osa)  LOC7458951 (ppo)  LOC25483315 (mtr)  LOC100776653 (gma)  LOC101255875 (sly)  LOC103860053 (bra)  LOC103866025 (bra)  LOC123062317 (tae)  LOC123062318 (tae)  LOC123071083 (tae)  LOC123071085 (tae)  LOC123079450 (tae)  LOC123079451 (tae)  LOC123440381 (hvu)  LOC123444621 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_001118500.1)
chlo 8,  nucl 1  (predict for NP_001323447.1)
nucl 6,  cyto_nucl 4,  mito 1,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001323448.1)
chlo 8,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_181677.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001118500.1)
chlo 4  (predict for NP_001323447.1)
other 7  (predict for NP_001323448.1)
mito 3  (predict for NP_181677.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03420 Nucleotide excision repair 6
ath03430 Mismatch repair 6
ath03410 Base excision repair 3
ath03440 Homologous recombination 3
Genes directly connected with ARP on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.4 HAG2 histone acetyltransferase of the GNAT family 2 [detail] 835775
7.3 EMB2775 ATPase family associated with various cellular activities (AAA) [detail] 832836
7.2 HPY2 RING/U-box superfamily protein [detail] 820746
6.5 RFC3 replication factor C subunit 3 [detail] 844083
6.1 RAD51C RAS associated with diabetes protein 51C [detail] 819136
5.9 AT4G23860 PHD finger protein-like protein [detail] 828485
Coexpressed
gene list		 [Coexpressed gene list for ARP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267099_at
267099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267099_at
267099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267099_at
267099_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818744      
Refseq ID (protein) NP_001118500.1 
NP_001323447.1 
NP_001323448.1 
NP_181677.1 


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