[←][→] ath   At2g41540 Gene
functional annotation
Function   6-phosphogluconate dehydrogenase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0051287 [list] [network] NAD binding  (29 genes)  TAS  
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
Protein NP_001031525.1  NP_001325243.1  NP_181685.1  NP_850352.1 
BLAST NP_001031525.1  NP_001325243.1  NP_181685.1  NP_850352.1 
Orthologous [Ortholog page] AT3G07690 (ath)  LOC4326512 (osa)  LOC4327964 (osa)  LOC4339200 (osa)  LOC7462766 (ppo)  LOC7468920 (ppo)  LOC7473597 (ppo)  LOC11418472 (mtr)  LOC18094318 (ppo)  LOC100781512 (gma)  LOC100794592 (gma)  LOC100796897 (gma)  LOC100797552 (gma)  LOC100807558 (gma)  LOC100810871 (gma)  LOC101260923 (sly)  LOC101264154 (sly)  LOC103857987 (bra)  LOC103866569 (bra)  LOC103870644 (bra)  LOC112418482 (mtr)  LOC123060930 (tae)  LOC123062322 (tae)  LOC123063395 (tae)  LOC123071087 (tae)  LOC123072370 (tae)  LOC123079455 (tae)  LOC123079738 (tae)  LOC123080619 (tae)  LOC123182470 (tae)  LOC123443798 (hvu)  LOC123444623 (hvu)  LOC123445433 (hvu) 
Subcellular
localization
wolf
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_001031525.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_001325243.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_181685.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_850352.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031525.1)
other 8  (predict for NP_001325243.1)
other 8  (predict for NP_181685.1)
other 8  (predict for NP_850352.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 4
ath00062 Fatty acid elongation 4
ath01040 Biosynthesis of unsaturated fatty acids 3
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
Genes directly connected with GPDHC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.4 LACS2 long-chain acyl-CoA synthetase 2 [detail] 841367
8.7 KCR1 beta-ketoacyl reductase 1 [detail] 843098
7.5 HCD1 3-hydroxyacyl-CoA dehydratase 1 [detail] 827089
7.5 FAR1 fatty acid reductase 1 [detail] 832311
6.1 AT5G62580 ARM repeat superfamily protein [detail] 836379
5.6 AT2G47630 alpha/beta-Hydrolases superfamily protein [detail] 819376
4.0 AT4G35840 RING/U-box superfamily protein [detail] 829738
Coexpressed
gene list		 [Coexpressed gene list for GPDHC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245112_at
245112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245112_at
245112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245112_at
245112_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818752      
Refseq ID (protein) NP_001031525.1 
NP_001325243.1 
NP_181685.1 
NP_850352.1 


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