[←][→] ath   AT2G41540 Gene
functional annotation
Function   6-phosphogluconate dehydrogenase family protein  
GO BP
GO:0046168 [list] [network] glycerol-3-phosphate catabolic process  (4 genes)  IEA  
GO:0006116 [list] [network] NADH oxidation  (5 genes)  IBA  
GO:0006072 [list] [network] glycerol-3-phosphate metabolic process  (6 genes)  IBA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0009331 [list] [network] glycerol-3-phosphate dehydrogenase complex  (5 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004367 [list] [network] glycerol-3-phosphate dehydrogenase [NAD+] activity  (4 genes)  IBA IGI  
GO:0051287 [list] [network] NAD binding  (66 genes)  TAS  
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (96 genes)
Protein NP_001031525.1  NP_001325243.1  NP_181685.1  NP_850352.1 
BLAST NP_001031525.1  NP_001325243.1  NP_181685.1  NP_850352.1 
Orthologous [Ortholog page] AT3G07690 (ath)  LOC4326512 (osa)  LOC4327964 (osa)  LOC4339200 (osa)  LOC7462766 (ppo)  LOC11418472 (mtr)  LOC11444654 (mtr)  LOC100191807 (zma)  LOC100233040 (vvi)  LOC100241426 (vvi)  LOC100273065 (zma)  LOC100273469 (zma)  LOC100781512 (gma)  LOC100794592 (gma)  LOC100796897 (gma)  LOC100797552 (gma)  LOC100807558 (gma)  LOC100810871 (gma)  LOC101260923 (sly)  LOC101264154 (sly)  LOC103857987 (bra)  LOC103866569 (bra)  LOC103870644 (bra)  LOC112418482 (mtr) 
Subcellular
localization
wolf
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_001031525.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_001325243.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_181685.1)
cyto 3,  E.R. 2,  cysk 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_850352.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031525.1)
other 8  (predict for NP_001325243.1)
other 8  (predict for NP_181685.1)
other 8  (predict for NP_850352.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 4
ath00062 Fatty acid elongation 4
ath01040 Biosynthesis of unsaturated fatty acids 3
ath00564 Glycerophospholipid metabolism 2
ath00071 Fatty acid degradation 2
Genes directly connected with GPDHC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 LACS2 long-chain acyl-CoA synthetase 2 [detail] 841367
7.7 KCR1 beta-ketoacyl reductase 1 [detail] 843098
7.1 PAS2 Protein-tyrosine phosphatase-like, PTPLA [detail] 830912
6.7 FAR1 fatty acid reductase 1 [detail] 832311
5.3 AT2G47630 alpha/beta-Hydrolases superfamily protein [detail] 819376
5.3 AT5G62580 ARM repeat superfamily protein [detail] 836379
5.2 AT1G35180 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [detail] 840405
Coexpressed
gene list		 [Coexpressed gene list for GPDHC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245112_at
245112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245112_at
245112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245112_at
245112_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818752      
Refseq ID (protein) NP_001031525.1 
NP_001325243.1 
NP_181685.1 
NP_850352.1 


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