ATTED-II : GeneID search result

[←][→] ath AT2G41560 Gene

functional annotation

Function

autoinhibited Ca(2+)-ATPase

GO BP

GO:0043069 [list] [network] negative regulation of programmed cell death	(26 genes)	IGI
GO:0070588 [list] [network] calcium ion transmembrane transport	(42 genes)	IEA
GO:0055081 [list] [network] anion homeostasis	(48 genes)	IMP
GO:0009624 [list] [network] response to nematode	(84 genes)	IEP
GO:0042742 [list] [network] defense response to bacterium	(399 genes)	IGI
GO:0009651 [list] [network] response to salt stress	(485 genes)	IGI
GO:0006970 [list] [network] response to osmotic stress	(563 genes)	IGI

GO CC

GO:0009705 [list] [network] plant-type vacuole membrane	(124 genes)	IDA
GO:0000325 [list] [network] plant-type vacuole	(169 genes)	IDA
GO:0005774 [list] [network] vacuolar membrane	(624 genes)	IDA
GO:0005773 [list] [network] vacuole	(1133 genes)	IDA TAS
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0005388 [list] [network] calcium transmembrane transporter activity, phosphorylative mechanism	(16 genes)	IBA ISS
GO:0005516 [list] [network] calmodulin binding	(182 genes)	IDA TAS
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_001323668.1 NP_001323669.1 NP_001323670.1 NP_181687.1

BLAST

NP_001323668.1 NP_001323669.1 NP_001323670.1 NP_181687.1

Orthologous

[Ortholog page] ACA11 (ath) LOC4326507 (osa) LOC4339199 (osa) LOC4349735 (osa) LOC4351449 (osa) LOC7496115 (ppo) LOC11445945 (mtr) LOC25479458 (mtr) LOC25491279 (mtr) LOC25501899 (mtr) LOC100241741 (vvi) LOC100246545 (vvi) LOC100783489 (gma) LOC100785768 (gma) LOC100791934 (gma) LOC100798481 (gma) LOC100801260 (gma) LOC100805063 (gma) LOC101253440 (sly) LOC101262099 (sly) LOC103630548 (zma) LOC103636305 (zma) LOC103640660 (zma) LOC103650775 (zma) LOC103654328 (zma) LOC103830094 (bra) LOC103841639 (bra) LOC103865892 (bra)

Subcellular
localization
wolf

plas 7, E.R. 1, golg 1	(predict for NP_001323668.1)
plas 7, E.R. 1, golg 1	(predict for NP_001323669.1)
plas 7, E.R. 1, golg 1	(predict for NP_001323670.1)
plas 6, vacu 2, golg 1, E.R._vacu 1	(predict for NP_181687.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001323668.1)
other 7	(predict for NP_001323669.1)
other 7	(predict for NP_001323670.1)
other 5, chlo 3	(predict for NP_181687.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00910	Nitrogen metabolism	3
ath01200	Carbon metabolism	2

Genes directly connected with ACA4 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.4	ASN2	asparagine synthetase 2	[detail]	836625
5.6	NIA1	nitrate reductase 1	[detail]	844112
5.3	NIA2	nitrate reductase 2	[detail]	840630

Coexpressed
gene list

[Coexpressed gene list for ACA4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245117_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245117_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245117_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818754
Refseq ID (protein)	NP_001323668.1
	NP_001323669.1
	NP_001323670.1
	NP_181687.1

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