[←][→] ath   AT2G41630 Gene
functional annotation
Function   transcription factor IIB  
GO BP
GO:0001174 [list] [network] transcriptional start site selection at RNA polymerase II promoter  (3 genes)  IBA  
GO:0010183 [list] [network] pollen tube guidance  (33 genes)  IMP  
GO:0009960 [list] [network] endosperm development  (34 genes)  IMP  
GO:0080092 [list] [network] regulation of pollen tube growth  (36 genes)  IMP  
GO:0006352 [list] [network] DNA-templated transcription, initiation  (56 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0097550 [list] [network] transcriptional preinitiation complex  (5 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0001139 [list] [network] RNA polymerase II complex recruiting activity  (3 genes)  IBA  
GO:0000979 [list] [network] RNA polymerase II core promoter sequence-specific DNA binding  (4 genes)  IBA  
GO:0017025 [list] [network] TBP-class protein binding  (17 genes)  IBA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_181694.1 
BLAST NP_181694.1 
Orthologous [Ortholog page] TFIIB1 (gma)  AT3G10330 (ath)  LOC4347689 (osa)  LOC7473606 (ppo)  LOC7484022 (ppo)  LOC11411517 (mtr)  LOC25483447 (mtr)  LOC25488804 (mtr)  LOC100193219 (zma)  LOC100248187 (vvi)  LOC100266630 (vvi)  LOC100267614 (vvi)  LOC100283348 (zma)  LOC100784014 (gma)  LOC100790355 (gma)  LOC100800061 (gma)  LOC101246877 (sly)  LOC103857988 (bra)  LOC103859340 (bra)  LOC103866568 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_181694.1)
Subcellular
localization
TargetP
other 9  (predict for NP_181694.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath04712 Circadian rhythm - plant 2
Genes directly connected with TFIIB on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 CKA2 casein kinase II, alpha chain 2 [detail] 824162
5.4 AT4G02880 ELKS/Rab6-interacting/CAST family protein [detail] 828150
5.4 AT3G54130 Josephin family protein [detail] 824580
4.8 ATH9 ABC2 homolog 9 [detail] 818597
Coexpressed
gene list		 [Coexpressed gene list for TFIIB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245114_at
245114_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245114_at
245114_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245114_at
245114_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818761      
Refseq ID (protein) NP_181694.1 


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