[←][→] ath   At2g41720 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (10 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP NAS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IMP ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (63 genes)  IMP  
KEGG
Protein NP_001323745.1  NP_850356.1  NP_850357.2 
BLAST NP_001323745.1  NP_850356.1  NP_850357.2 
Orthologous [Ortholog page] LOC4342717 (osa)  LOC7473612 (ppo)  LOC11418476 (mtr)  LOC100814643 (gma)  LOC101267511 (sly)  LOC103866580 (bra)  LOC123045037 (tae)  LOC123052762 (tae)  LOC123188627 (tae)  LOC123426169 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_001323745.1)
chlo 4,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_850356.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for NP_850357.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001323745.1)
other 7  (predict for NP_850356.1)
mito 6,  other 4  (predict for NP_850357.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB2654 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.7 PDE338 Nucleic acid-binding proteins superfamily [detail] 843502
7.8 RIF10 polyribonucleotide nucleotidyltransferase [detail] 821181
7.7 BPG2 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 824885
Coexpressed
gene list		 [Coexpressed gene list for EMB2654]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260523_at
260523_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260523_at
260523_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260523_at
260523_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818771      
Refseq ID (protein) NP_001323745.1 
NP_850356.1 
NP_850357.2 


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