[][] ath   AT2G41840 Gene
functional annotation
Function   Ribosomal protein S5 family protein
GO BP
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_181715.1 
BLAST NP_181715.1 
Orthologous [Ortholog page] AT3G57490 (ath)XW6 (ath)AT1G58684 (ath)AT1G58983 (ath)AT1G59359 (ath)LOC4334512 (osa)LOC4342695 (osa)LOC7465143 (ppo)LOC7468977 (ppo)LOC7473627 (ppo)LOC11417021 (mtr)LOC25482548 (mtr)LOC100260573 (vvi)LOC100283974 (zma)LOC100383062 (zma)LOC100797105 (gma)LOC100809096 (gma)LOC100810363 (gma)LOC100820352 (gma)LOC101254082 (sly)LOC101258363 (sly)LOC103625791 (zma)LOC103828995 (bra)LOC103857998 (bra)LOC103866593 (bra)
Subcellular
localization
wolf
cyto 5,  nucl 1,  pero 1,  mito 1,  extr 1,  cysk 1,  nucl_plas 1  (predict for NP_181715.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_181715.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
Genes directly connected with AT2G41840 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
14.9 AT4G16720 Ribosomal protein L23/L15e family protein [detail] 827375
14.5 AT4G34670 Ribosomal protein S3Ae [detail] 829619
14.0 EMB3010 Ribosomal protein S6e [detail] 830900
Coexpressed
gene list
[Coexpressed gene list for AT2G41840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260497_at
260497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260497_at
260497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260497_at
260497_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 818784    
Refseq ID (protein) NP_181715.1 


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