[←][→] ath   At2g42300 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001031530.1  NP_001324788.1  NP_001324789.1  NP_001324790.1  NP_850368.1 
BLAST NP_001031530.1  NP_001324788.1  NP_001324789.1  NP_001324790.1  NP_850368.1 
Orthologous [Ortholog page] AT3G57800 (ath)  LOC4341525 (osa)  LOC7468956 (ppo)  LOC11421654 (mtr)  LOC11431256 (mtr)  LOC18099855 (ppo)  PTF1 (gma)  LOC100799133 (gma)  LOC100810862 (gma)  LOC100814124 (gma)  LOC101258908 (sly)  LOC103830121 (bra)  LOC103841682 (bra)  LOC103863024 (bra)  LOC103866621 (bra)  LOC123153536 (tae)  LOC123160148 (tae)  LOC123165689 (tae)  LOC123411689 (hvu) 
Subcellular
localization
wolf
nucl 7,  chlo 3  (predict for NP_001031530.1)
nucl 6,  chlo 4  (predict for NP_001324788.1)
nucl 5,  chlo 4,  cyto 1,  vacu 1  (predict for NP_001324789.1)
nucl 6,  chlo 4  (predict for NP_001324790.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_850368.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001031530.1)
other 7,  mito 3  (predict for NP_001324788.1)
other 7,  mito 3  (predict for NP_001324789.1)
other 7,  mito 3  (predict for NP_001324790.1)
other 7,  mito 3  (predict for NP_850368.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G42300 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 825530
5.6 AT4G18570 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827588
5.2 AT3G62630 stress response NST1-like protein (DUF1645) [detail] 825437
Coexpressed
gene list		 [Coexpressed gene list for AT2G42300]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265880_at
265880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265880_at
265880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265880_at
265880_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818831      
Refseq ID (protein) NP_001031530.1 
NP_001324788.1 
NP_001324789.1 
NP_001324790.1 
NP_850368.1 


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