ATTED-II : GeneID search result

[←][→] ath AT2G42540 Gene

functional annotation

Function

cold-regulated 15a

GO BP

GO:0009667 [list] [network] plastid inner membrane organization	(1 genes)	IDA
GO:0009819 [list] [network] drought recovery	(12 genes)	IDA
GO:0050821 [list] [network] protein stabilization	(20 genes)	IDA
GO:0051260 [list] [network] protein homooligomerization	(23 genes)	IDA
GO:0050826 [list] [network] response to freezing	(28 genes)	IDA
GO:0051259 [list] [network] protein complex oligomerization	(46 genes)	IDA
GO:0010286 [list] [network] heat acclimation	(53 genes)	IDA
GO:0009631 [list] [network] cold acclimation	(59 genes)	IDA IEP IMP
GO:0061077 [list] [network] chaperone-mediated protein folding	(59 genes)	IDA
GO:0009644 [list] [network] response to high light intensity	(65 genes)	IEP
GO:0010017 [list] [network] red or far-red light signaling pathway	(76 genes)	IEP
GO:0007623 [list] [network] circadian rhythm	(111 genes)	IGI
GO:0010150 [list] [network] leaf senescence	(111 genes)	IMP
GO:0009414 [list] [network] response to water deprivation	(361 genes)	IEP
GO:0009409 [list] [network] response to cold	(411 genes)	IEP IGI
GO:0009651 [list] [network] response to salt stress	(485 genes)	IEP
GO:0006970 [list] [network] response to osmotic stress	(563 genes)	IGI
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IEP
GO:0009416 [list] [network] response to light stimulus	(700 genes)	IEP

GO CC

GO:0009941 [list] [network] chloroplast envelope	(666 genes)	IDA
GO:0009570 [list] [network] chloroplast stroma	(750 genes)	IDA
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IDA ISM

GO MF

GO:0005534 [list] [network] galactose binding	(6 genes)	IDA
GO:0008289 [list] [network] lipid binding	(278 genes)	IDA

KEGG

Protein

NP_001189733.1 NP_001323750.1 NP_181782.1 NP_850371.1

BLAST

NP_001189733.1 NP_001323750.1 NP_181782.1 NP_850371.1

Orthologous

[Ortholog page] COR15B (ath) LOC103858020 (bra) LOC103858021 (bra)

Subcellular
localization
wolf

chlo 5, cyto 3, chlo_mito 3	(predict for NP_001189733.1)
chlo 6, cyto 2, nucl 1, mito 1	(predict for NP_001323750.1)
chlo 10	(predict for NP_181782.1)
chlo 6, cyto 2, nucl 1, mito 1	(predict for NP_850371.1)

Subcellular
localization
TargetP

mito 3, chlo 3	(predict for NP_001189733.1)
mito 3, chlo 3	(predict for NP_001323750.1)
chlo 5	(predict for NP_181782.1)
mito 3, chlo 3	(predict for NP_850371.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with COR15A on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
23.0	COR15B	cold regulated 15b	[detail]	818853
10.5	KIN2	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)	[detail]	831454
9.4	LTI78	low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)	[detail]	835307
8.3	COR413IM1	COLD REGULATED 314 INNER MEMBRANE 1	[detail]	839815
7.3	AT1G51090	Heavy metal transport/detoxification superfamily protein	[detail]	841532
4.7	SWEET4	Nodulin MtN3 family protein	[detail]	822424

Coexpressed
gene list

[Coexpressed gene list for COR15A]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263497_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263497_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263497_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818854
Refseq ID (protein)	NP_001189733.1
	NP_001323750.1
	NP_181782.1
	NP_850371.1

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