[←][→] ath   At2g42540 Gene
functional annotation
Function   cold-regulated 15a    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009667 [list] [network] plastid inner membrane organization  (2 genes)  IDA  
GO:0009819 [list] [network] drought recovery  (12 genes)  IDA  
GO:0050821 [list] [network] protein stabilization  (15 genes)  IDA  
GO:0061077 [list] [network] chaperone-mediated protein folding  (18 genes)  IDA  
GO:0050826 [list] [network] response to freezing  (27 genes)  IDA  
GO:0051260 [list] [network] protein homooligomerization  (28 genes)  IDA  
GO:0051259 [list] [network] protein complex oligomerization  (43 genes)  IDA  
GO:0010017 [list] [network] red or far-red light signaling pathway  (52 genes)  IEP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IDA IEP IMP  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IEP  
GO:0010286 [list] [network] heat acclimation  (71 genes)  IDA  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IGI  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP IGI  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IGI  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0005534 [list] [network] galactose binding  (2 genes)  IDA  
GO:0008289 [list] [network] lipid binding  (240 genes)  IDA  
KEGG
Protein NP_001189733.1  NP_001323750.1  NP_181782.1  NP_850371.1 
BLAST NP_001189733.1  NP_001323750.1  NP_181782.1  NP_850371.1 
Orthologous [Ortholog page] COR15B (ath)  LOC103858020 (bra)  LOC103858021 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 3,  chlo_mito 3  (predict for NP_001189733.1)
chlo 6,  cyto 2,  nucl 1,  mito 1  (predict for NP_001323750.1)
chlo 10  (predict for NP_181782.1)
chlo 6,  cyto 2,  nucl 1,  mito 1  (predict for NP_850371.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_001189733.1)
mito 3,  chlo 3  (predict for NP_001323750.1)
chlo 5  (predict for NP_181782.1)
mito 3,  chlo 3  (predict for NP_850371.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with COR15A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
24.1 COR15B cold regulated 15b [detail] 818853
11.0 KIN2 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) [detail] 831454
9.7 LTI78 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) [detail] 835307
9.3 COR413IM1 COLD REGULATED 314 INNER MEMBRANE 1 [detail] 839815
9.0 KIN1 stress-responsive protein (KIN1) / stress-induced protein (KIN1) [detail] 831453
7.9 AT1G51090 Heavy metal transport/detoxification superfamily protein [detail] 841532
5.1 SWEET4 Nodulin MtN3 family protein [detail] 822424
Coexpressed
gene list		 [Coexpressed gene list for COR15A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263497_at
263497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263497_at
263497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263497_at
263497_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818854      
Refseq ID (protein) NP_001189733.1 
NP_001323750.1 
NP_181782.1 
NP_850371.1 


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